Evidence map›Paper›PMID 39445808›Full record

ArticleGenome biology and evolution2024

Genomes of Microtus Rodents Highlight the Importance of Olfactory and Immune Systems in Their Fast Radiation.

Alexandre Gouy, Xuejing Wang, Adamandia Kapopoulou, Samuel Neuenschwander, Emanuel Schmid, Laurent Excoffier, Gerald Heckel

Abstract read
In one paragraph

Article in Genome biology and evolution, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alexandre GouyInstitute of Ecology and Evolution, University of Bern, Bern, Switzerland.ORCID 0000-0002-2478-8475
Xuejing WangInstitute of Ecology and Evolution, University of Bern, Bern, Switzerland.ORCID 0000-0002-1258-8214
Adamandia KapopoulouInstitute of Ecology and Evolution, University of Bern, Bern, Switzerland.ORCID 0000-0003-4192-4923
Samuel NeuenschwanderVital-IT, Swiss Institute of Bioinformatics, Lausanne, Switzerland.ORCID 0000-0002-4080-5546
Emanuel SchmidVital-IT, Swiss Institute of Bioinformatics, Lausanne, Switzerland.ORCID 0000-0003-1339-5120
Laurent ExcoffierInstitute of Ecology and Evolution, University of Bern, Bern, Switzerland.ORCID 0000-0002-7507-6494
Gerald HeckelInstitute of Ecology and Evolution, University of Bern, Bern, Switzerland.ORCID 0000-0002-0162-323X

Funding

China Scholarship Council 201706380049Swiss National Science Foundation
6 · The paper itself

Abstract

The characterization of genes and biological functions underlying functional diversification and the formation of species is a major goal of evolutionary biology. In this study, we investigated the fast radiation of Microtus voles, one of the most speciose group of mammals, which shows strong genetic divergence despite few readily observable morphological differences. We produced an annotated reference genome for the common vole, Microtus arvalis, and resequenced the genomes of 10 different species and evolutionary lineages spanning the Microtus speciation continuum. Our full-genome sequences illustrate the recent and fast diversification of this group, and we identified genes in highly divergent genomic windows that have likely particular roles in their radiation. We found three biological functions enriched for highly divergent genes in most Microtus species and lineages: olfaction, immunity and metabolism. In particular, olfaction-related genes (mostly olfactory receptors and vomeronasal receptors) are fast evolving in all Microtus species indicating the exceptional importance of the olfactory system in the evolution of these rodents. Of note is e.g. the shared signature among vole species on Olfr1019 which has been associated with fear responses against predator odors in rodents. Our analyses provide a genome-wide basis for the further characterization of the ecological factors and processes of natural and sexual selection that have contributed to the fast radiation of Microtus voles.

Indexed as

ArvicolinaeGenomeAnimalsEvolution, MolecularGenetic SpeciationImmune SystemPhylogenyReceptors, OdorantSmellReceptors, Odorantarvicolinaegenome scanrapid evolutionreference genomerodent diversificationvoles

Identifiers

PMID39445808
PMCPMC11579656

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.