Evidence map›Paper›PMID 39445803›Full record

ArticleJournal of bacteriology2024

Environmental alkalization suppresses deployment of virulence strategies in

Zichu Yang, Haibi Wang, Robert Keebler, Amelia Lovelace, Hsiao-Chun Chen, Brian Kvitko, Bryan Swingle

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of bacteriology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. The two-component regulator CvsR has a small core regulonbioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zichu YangPlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA.
Haibi WangPlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA.
Robert KeeblerPlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA.
Amelia LovelaceThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0002-6793-7493
Hsiao-Chun ChenDepartment of Plant Pathology, University of Georgia, Athens, Georgia, USA.
Brian KvitkoDepartment of Plant Pathology, University of Georgia, Athens, Georgia, USA.ORCID 0000-0002-9094-4069
Bryan SwinglePlant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA.ORCID 0000-0001-5048-7791

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant pathogenic bacteria encounter a drastic increase in apoplastic pH during the early stages of plant immunity. The effects of alkalization on pathogen-host interactions have not been comprehensively characterized. Here, we used a global transcriptomic approach to assess the impact of environmental alkalization on

Indexed as

Bacterial ProteinsGene Expression Regulation, BacterialPseudomonas syringaeVirulence FactorsHydrogen-Ion ConcentrationPlant DiseasesSolanum lycopersicumVirulenceBacterial ProteinsVirulence Factorsenvironmental sensingpathogenesisplant-microbe interactionsplant pathologyPseudomonas syringaetranscriptomevirulence induction and suppression

Identifiers

PMID39445803
PMCPMC11580431

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.