Evidence map›Paper›PMID 39441340›Full record

ArticleProtoplasma2025

Predicting the role of β-GAL genes in bean under abiotic stress and genome-wide characterization of β-GAL gene family members.

Azize Buttanri, Ayşe Gül Kasapoğlu, Burak Muhammed Öner, Ahmed Sidar Aygören, Selman Muslu, Emre İlhan, Ertan Yildirim, Murat Aydin

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Article in Protoplasma, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Azize ButtanriDepartment of Molecular Biology and Genetics, Faculty of Science, Erzurum Technical University, Erzurum, Turkey.ORCID http://orcid.org/0009-0005-7398-0083
Ayşe Gül KasapoğluDepartment of Molecular Biology and Genetics, Faculty of Science, Erzurum Technical University, Erzurum, Turkey. aysegul.kasapoglu@erzurum.edu.tr.ORCID http://orcid.org/0000-0002-6447-4921
Burak Muhammed ÖnerDepartment of Molecular Biology and Genetics, Faculty of Science, Erzurum Technical University, Erzurum, Turkey.ORCID http://orcid.org/0000-0003-2785-2089
Ahmed Sidar AygörenDepartment of Molecular Biology and Genetics, Faculty of Science, Erzurum Technical University, Erzurum, Turkey.ORCID http://orcid.org/0000-0002-6264-9935
Selman MusluDepartment of Molecular Biology and Genetics, Faculty of Science, Erzurum Technical University, Erzurum, Turkey.ORCID http://orcid.org/0000-0003-4777-0726
Emre İlhanDepartment of Molecular Biology and Genetics, Faculty of Science, Erzurum Technical University, Erzurum, Turkey.ORCID http://orcid.org/0000-0002-8404-7900
Ertan YildirimDepartment of Agricultural Biotechnology, Faculty of Agriculture, Ataturk University, Erzurum, Turkey.ORCID http://orcid.org/0000-0003-3369-0645
Murat AydinDepartment of Agricultural Biotechnology, Faculty of Agriculture, Ataturk University, Erzurum, Turkey.ORCID http://orcid.org/0000-0003-1091-0609

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Β-Gals are a subgroup of the glycoside hydrolase (GH) family of enzymes, which possess the Glyco_hydro_35 (GH35) domain. Although studies have been conducted on the β-Gal gene family in numerous plant species, no such research has been conducted on beans. The purpose of this study was to determine the gene expression levels of β-Gal genes in the leaf tissue of P. vulgaris under salt and drought stress using quantitative real-time polymerase chain reaction (qRT-PCR) and to perform a comprehensive analysis of β-Gal gene family members using bioinformatics tools. In the bean genome, 25 Pvul-βGAL proteins with amino acid numbers ranging from 291 to 1119, molecular weights from 32.94 to 126.56 kDa, and isoelectric points from 5.46 to 9.08 were identified. Both segmental and tandem duplication have occurred in β-Gal genes in the bean genome, and Pvul-BGAL genes have been subject to negative selection in the evolutionary process. For a deeper comprehension of the evolutionary proximity of Pvul-BGAL genes, a phylogenetic tree and synteny map were drawn together with Arabidopsis thaliana and Glycine max β-Gal genes. The expression profiles of β-Gal genes in different tissues of the bean were determined in silico. In addition, the expression profiles of β-Gal genes in the leaves of bean plants subjected to drought and salt stress were analyzed, and the role of β-Gal genes in salt and drought stress was estimated. In this study, the role of β-Gal gene family in abiotic stress response and the characterization of β-Gal genes in beans were determined for the first time and will provide a basis for future functional genomics studies.

Indexed as

beta-GalactosidaseGenome, PlantMultigene FamilyPhaseolusStress, PhysiologicalDroughtsGene Expression Regulation, PlantPhylogenyPlant Proteinsbeta-GalactosidasePlant ProteinsGH35Glycoside hydrolase (GH)P. vulgarisQRT-PCRβ-galactosidase

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.