Evidence map›Paper›PMID 39436697›Full record

ArticleJCI insight2024

Autosomal-dominant macular dystrophy linked to a chromosome 17 tandem duplication.

Rabiat Adele, Rowaida Hussein, Erika Tavares, Kashif Ahmed, Matteo Di Scipio, Jason Charish, Minggao Liang, Simon Monis, Anupreet Tumber, Xiaoyan Chen and 13 more

Abstract read
In one paragraph

Article in JCI insight, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Rabiat AdeleGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Rowaida HusseinGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Erika TavaresGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Kashif AhmedGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Matteo Di ScipioGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Jason CharishVision Division, Krembil Research Institute, Toronto Western Hospital, Toronto, Ontario, Canada.
Minggao LiangGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Simon MonisGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Anupreet TumberDepartment of Ophthalmology and Visual Sciences and.
Xiaoyan ChenVision Division, Krembil Research Institute, Toronto Western Hospital, Toronto, Ontario, Canada.
Tara A PatonGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Nicole M RoslinGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Christabel EileenGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Evgueni IvakineGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Nishanth E SunnyDepartment of Animal and Avian Sciences, University of Maryland, College Park, Maryland, USA.
Michael D WilsonGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Eric CamposGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Raju Vs RajalaDepartments of Ophthalmology, Physiology, and Cell Biology and Dean McGee Eye Institute, University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma, USA.
Jason T MaynesMolecular Medicine program and.
Philippe P MonnierVision Division, Krembil Research Institute, Toronto Western Hospital, Toronto, Ontario, Canada.
Andrew D PatersonGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Elise HéonGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.
Ajoy VincentGenetics & Genome Biology program, Hospital for Sick Children (HSC), Toronto, Ontario, Canada.

Funding

Neuroprotection Mechanism for PhotoreceptorsR01EY030024 · NEI · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI RAJALA, RAJU VS · 2019 to 2022
$1.7M
NEI NIH HHS R01 EY030024
6 · The paper itself

Abstract

Hereditary macular dystrophies (HMDs) are a genetically diverse group of disorders that cause central vision loss due to photoreceptor and retinal pigment epithelium (RPE) damage. We investigated a family with a presumed novel autosomal-dominant HMD characterized by faint, hypopigmented RPE changes involving the central retina. Genome and RNA sequencing identified the disease-causing variant to be a 560 kb tandem duplication on chromosome 17 [NC_000017.10 (hg19): g.4012590_4573014dup], which led to the formation of a novel ZZEF1-ALOX15 fusion gene, which upregulates ALOX15. ALOX15 encodes a lipoxygenase involved in polyunsaturated fatty acid metabolism. Functional studies showed retinal disorganization and photoreceptor and RPE damage following electroporation of the chimera transcript in mouse retina. Photoreceptor damage also occurred following electroporation with a native ALOX15 transcript but not with a near-null ALOX15 transcript. Affected patients' lymphoblasts demonstrated lower levels of ALOX15 substrates and an accumulation of neutral lipids. We implicated the fusion gene as the cause of this family's HMD, due to mislocalization and overexpression of ALOX15, driven by the ZZEF1 promoter. To our knowledge, this is the first reported instance of a fusion gene leading to HMD or inherited retinal dystrophy, highlighting the need to prioritize duplication analysis in unsolved retinal dystrophies.

Indexed as

Arachidonate 15-LipoxygenaseMacular DegenerationPedigreeAdultAnimalsChromosome DuplicationFemaleHumansMaleMiceMiddle AgedRetinaRetinal Pigment EpitheliumALOX15 protein, humanArachidonate 15-LipoxygenaseGenetic diseasesGeneticsGenetic variationOphthalmologyRetinopathy

Identifiers

PMID39436697
PMCPMC11623951

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.