Evidence map›Paper›PMID 39433954›Full record

ArticleScientific reports2024

H3K9me3 demethylation by JMJD2B is regulated by pirfenidone resulting in improved NASH.

J Samael Rodriguez-Sanabria, Rebeca Rosas-Campos, Ángel Vázquez-Esqueda, Ivonne Palacios-Marín, Josep Jiménez-Chillaron, Rebeca Escutia-Gutiérrez, Luis Felipe Jave-Suarez, Marina Galicia-Moreno, Hugo Christian Monroy-Ramirez, Eira Cerda-Reyes and 5 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Noninvasive Evaluation of Prolonged-Release Pirfenidone in Compensated Liver Cirrhosis. ODISEA Study, a Randomised Trial.Liver international : official journal of the International Association for the Study of the Liver · 2025
    Trial
  2. Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

J Samael Rodriguez-SanabriaDepartment of Molecular Biology and Genomics, Institute for Molecular Biology in Medicine and Gene Therapy, Health Sciences University Center, University of Guadalajara, 44340, Guadalajara, Jalisco, Mexico.
Rebeca Rosas-CamposDepartment of Molecular Biology and Genomics, Institute for Molecular Biology in Medicine and Gene Therapy, Health Sciences University Center, University of Guadalajara, 44340, Guadalajara, Jalisco, Mexico.
Ángel Vázquez-EsquedaDepartment of Molecular Biology and Genomics, Institute for Molecular Biology in Medicine and Gene Therapy, Health Sciences University Center, University of Guadalajara, 44340, Guadalajara, Jalisco, Mexico.
Ivonne Palacios-MarínInstitut de Recerca Sant Joan de Déu, Endocrinology, c/ Santa Rosa 39-57, 4ª planta, 08950, Esplugues, Barcelona, Spain.
Josep Jiménez-ChillaronInstitut de Recerca Sant Joan de Déu, Endocrinology, c/ Santa Rosa 39-57, 4ª planta, 08950, Esplugues, Barcelona, Spain.
Rebeca Escutia-GutiérrezDepartment of Molecular Biology and Genomics, Institute for Molecular Biology in Medicine and Gene Therapy, Health Sciences University Center, University of Guadalajara, 44340, Guadalajara, Jalisco, Mexico.
Luis Felipe Jave-SuarezDivisión de Inmunología, Centro de Investigación Biomédica de Occidente, Instituto Mexicano del Seguro Social, 44340, Guadalajara, Mexico.
Marina Galicia-MorenoDepartment of Molecular Biology and Genomics, Institute for Molecular Biology in Medicine and Gene Therapy, Health Sciences University Center, University of Guadalajara, 44340, Guadalajara, Jalisco, Mexico.
Hugo Christian Monroy-RamirezDepartment of Molecular Biology and Genomics, Institute for Molecular Biology in Medicine and Gene Therapy, Health Sciences University Center, University of Guadalajara, 44340, Guadalajara, Jalisco, Mexico.
Eira Cerda-ReyesInvestigation Department, Hospital Central Militar, 11200, Mexico City, Mexico.
Mónica Almeida-LópezHealth Sciences University Center, University of Guadalajara, 44340, Guadalajara, Jalisco, Mexico.
Erika Martinez-LopezDepartment of Molecular Biology and Genomics, Institute of Translational Nutrigenetics and Nutrigenomics, CUCS, University of Guadalajara, 44340, Guadalajara, Mexico.
Luis Alonso HerreraTecnologico de Monterrey, EMCS, 45201, Zapopan, Mexico.
Juan Armendáriz-BorundaDepartment of Molecular Biology and Genomics, Institute for Molecular Biology in Medicine and Gene Therapy, Health Sciences University Center, University of Guadalajara, 44340, Guadalajara, Jalisco, Mexico. armdbo@gmail.com.
Ana Sandoval-RodriguezDepartment of Molecular Biology and Genomics, Institute for Molecular Biology in Medicine and Gene Therapy, Health Sciences University Center, University of Guadalajara, 44340, Guadalajara, Jalisco, Mexico. anasol44@hotmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NASH is characterized by hepatic lipid accumulation and inflammation; and JMJD2B-a histone demethylase-upregulation has been linked to its progression. Pirfenidone (PFD) is an antifibrotic agent with anti-inflammatory and antioxidant effects recognized to decrease NASH symptoms. Herein, our aim was to investigate PFD-induced epigenetics mechanisms involving JMJD2B and histone modifications in experimental NASH. Male C57BL/6J mice were fed with normo-diet, or high fat/carbohydrate diet (HF) for 16 weeks. A HF-subgroup was treated with PFD 300 mg/kg/d from week 8th to the end of protocol. Insulin tolerance test and liver and fat histological and biochemical analyses were carried out. Hepatic transcriptome was examined. Liver proteins were studied by western blot (WB) and Chromatin immunoprecipitation. In vitro, lipotoxicity was induced in HepG2 cells and proteins were evaluated using WB. Molecular docking was used to explore binding of PFD to JMJD2B. Mice treated with PFD reduced weight gain, epididymal fat and inflammatory nodules, and steatosis in liver tissue, as well as, improved biochemical test. PFD modified the expression of Jmjd2b, Pparg, Fasn and Srebp1, and restored JMJD2B protein and H3K9me3 repressive mark, both in animal and cell models. PFD increased hepatic enrichment of H3K9me2 and H3K9me3 at the promoter region of Fasn and Srebp1, and Pparg. In HepG2 cells, PFD reduced lipid vacuole accumulation. In silico, PFD interacted with JMJD2B catalytic site. PFD is an epigenetic regulator modifying JMJD2B activity, resulting in reduced NASH traits.

Indexed as

HistonesJumonji Domain-Containing Histone DemethylasesNon-alcoholic Fatty Liver DiseasePyridonesAnimalsDemethylationDiet, High-FatDisease Models, AnimalEpigenesis, GeneticHep G2 CellsHumansLiverMaleMiceMice, Inbred C57BLMolecular Docking SimulationHistonesJumonji Domain-Containing Histone DemethylasesKdm4b protein, mousepirfenidonePPAR gammaPparg protein, mousePyridonesSrebf1 protein, mouseSterol Regulatory Element Binding Protein 1H3K9JMJD2BMASLDPirfenidone

Identifiers

PMID39433954
PMCPMC11494037

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.