Evidence map›Paper›PMID 39433714›Full record

ArticleJournal of the Association for Research in Otolaryngology : JARO2024

Vital Dye Uptake of YO-PRO-1 and DASPEI Depends Upon Mechanoelectrical Transduction Function in Zebrafish Hair Cells.

Ashley Scott Patterson, Joseph Dugdale, Alaa Koleilat, Anna Krauss, Gabriel A Hernandez-Herrera, Jasmine G Wallace, Cassidy Petree, Gaurav K Varshney, Lisa A Schimmenti

Abstract read
In one paragraph

Article in Journal of the Association for Research in Otolaryngology : JARO, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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  5. Mutation of the GDP-Fucose Biosynthesis GeneInternational journal of molecular sciences · 2025
    Article
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  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Ashley Scott PattersonInitiative for Maximizing Student Development Program, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA.
Joseph DugdaleDepartment of Otorhinolaryngology, Head and Neck Surgery, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA.
Alaa KoleilatMayo Clinic Graduate School of Biomedical Science, 200 First Street SW, Rochester, MN, 55905, USA.
Anna KraussInitiative for Maximizing Student Development Program, Mayo Clinic, Rochester, MN, USA.
Gabriel A Hernandez-HerreraMayo Clinic Graduate School of Biomedical Sciences, 200 First Street SW, Rochester, MN, 55905, USA.
Jasmine G WallaceSummer Research Fellowship Program, Mayo Clinic, 200 First Street SW, Rochester, MN, 55905, USA.
Cassidy PetreeGenes & Human Disease Research Program, Oklahoma Medical Research Foundation, 825 NE 13Th St, Oklahoma City, OK, 73104, USA.
Gaurav K VarshneyGenes & Human Disease Research Program, Oklahoma Medical Research Foundation, 825 NE 13Th St, Oklahoma City, OK, 73104, USA.
Lisa A SchimmentiDepartments of Clinical Genomics, Otorhinolaryngology, Head and Neck Surgery, Ophthalmology, and Biochemistry and Molecular Biology, Mayo Clinic, 200 First Street Southwest, Rochester, MN, 55905, USA. schimmenti.lisa@mayo.edu.ORCID http://orcid.org/0000-0003-3154-4249

Funding

Functional Analysis of GWAS loci associated with hearing loss.R21DC020317 · NIDCD · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI VARSHNEY, GAURAV K · 2023 to 2024
$469k
NIDCD NIH HHS R21 DC020317NIDCD NIH HHS R21DC020317
6 · The paper itself

Abstract

purposeVital dyes allow the visualization of cells in vivo without causing tissue damage, making them a useful tool for studying lateral line and inner ear hair cells in living zebrafish and other vertebrates. FM1-43, YO-PRO-1, and DASPEI are three vital dyes commonly used for hair cell visualization. While it has been established that FM1-43 enters hair cells of zebrafish and other organisms through the mechanoelectrical transduction (MET) channel, the mechanism of entry into hair cells for YO-PRO-1 and DASPEI has not been established despite widespread use. We hypothesize that YO-PRO-1 and DASPEI entry into zebrafish hair cells is MET channel uptake dependent similar to FM1-43.

methodsTo test this hypothesis, we used both genetic and pharmacologic means to block MET channel function. Genetic based MET channel assays were conducted with two different mechanotransduction defective zebrafish lines, specifically the myo7aa

resultsFive-day post fertilization (5dpf) myo7aa

conclusionThese results indicate that YO-PRO-1 and DASPEI entry into zebrafish hair cells is MET channel dependent similar to FM1-43. This knowledge expands the repertoire of vital dyes that can be used to assess mechanotransduction and MET channel function in zebrafish and other vertebrate models of hair cell function.

Indexed as

Hair Cells, AuditoryMechanotransduction, CellularQuaternary Ammonium CompoundsQuinolinium CompoundsXanthenesZebrafishAnimalsBenzoxazolesFluorescent DyesPyridinium CompoundsBenzoxazolesFluorescent DyesFM1 43Pyridinium CompoundsQuaternary Ammonium CompoundsQuinolinium CompoundsXanthenesYO-PRO 1cdh23Gadolinium(iii) chlorideMechanoelectrical transductionmyo7aaVital dyesZebrafish (Danio rerio)

Identifiers

PMID39433714
PMCPMC11683040

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.