Evidence map›Paper›PMID 39432824›Full record

ArticleThe journal of physical chemistry letters2024

Conductance Channels in a Single-Entity Enzyme.

Rafael Neri Prystaj Colombo, Steffane Q Nascimento, Frank Nelson Crespilho

Abstract read
In one paragraph

Article in The journal of physical chemistry letters, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Rafael Neri Prystaj Colombo1 São Carlos Institute of Chemistry, University of São Paulo (USP), São Carlos, SP 13566-590, Brazil.ORCID 0000-0001-8126-4398
Steffane Q Nascimento1 São Carlos Institute of Chemistry, University of São Paulo (USP), São Carlos, SP 13566-590, Brazil.
Frank Nelson Crespilho1 São Carlos Institute of Chemistry, University of São Paulo (USP), São Carlos, SP 13566-590, Brazil.ORCID 0000-0003-4830-652X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

For a long time, the prevailing view in the scientific community was that proteins, being complex macromolecules composed of amino acid chains linked by peptide bonds, adopt folded structure with insulating or semiconducting properties, with high bandgaps. However, recent discoveries of unexpectedly high conductance levels, reaching values in the range of dozens of nanosiemens (nS) in proteins, have challenged this conventional understanding. In this study, we used scanning tunneling microscopy (STM) to explore the single-entity conductance properties of enzymatic channels, focusing on bilirubin oxidase (BOD) as a model metalloprotein. By immobilizing BOD on a conductive carbon surface, we discern its preferred orientation, facilitating the formation of electronic and ionic channels. These channels show efficient electron transport (ETp), with apparent conductance up to the 15 nS range. Notably, these conductance pathways are localized, minimizing electron transport barriers due to solvents and ions, underscoring BOD's redox versatility. Furthermore, electron transfer (ET) within the BOD occurs via preferential pathways. The alignment of the conductance channels with hydrophilicity maps, molecular vacancies, and regions accessible to electrolytes explains the observed conductance values. Additionally, BOD exhibits redox activity, with its active center playing a critical role in the ETp process. These findings significantly advance our understanding of the intricate mechanisms that govern ETp processes in proteins, offering new insights into the conductance of metalloproteins.

Indexed as

Oxidoreductases Acting on CH-CH Group DonorsCarbonElectric ConductivityElectron TransportEnzymes, ImmobilizedMicroscopy, Scanning TunnelingOxidation-Reductionbilirubin oxidaseCarbonEnzymes, ImmobilizedOxidoreductases Acting on CH-CH Group Donors

Identifiers

PMID39432824
PMCPMC11533225

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.