Evidence map›Paper›PMID 39432194›Full record

ArticleWorld journal of microbiology & biotechnology2024

Cold-adapted characteristics and gene knockout of alkyl hydroperoxide reductase subunit C in Antarctic Psychrobacter sp. ANT206.

Yanhua Hou, Jiarui Qiao, Shumiao Hou, Yatong Wang, Quanfu Wang

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Article in World journal of microbiology & biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Yanhua HouSchool of Marine Science and Technology, Harbin Institute of Technology, Weihai, 264209, China.
Jiarui QiaoSchool of Marine Science and Technology, Harbin Institute of Technology, Weihai, 264209, China.
Shumiao HouSchool of Marine Science and Technology, Harbin Institute of Technology, Weihai, 264209, China.
Yatong WangSchool of Marine Science and Technology, Harbin Institute of Technology, Weihai, 264209, China. wangyatong199311@163.com.
Quanfu WangSchool of Marine Science and Technology, Harbin Institute of Technology, Weihai, 264209, China. wangquanfuhit@hit.edu.cn.

Funding

2023 Harbin Institute of Technology Weihai Campus Teaching Reform Research Project 2023MSZZ03Fundamental Research Funds for the Central Universities HIT.DZJJ.2023151he project of 'Double first-class' discipline construction fund 2023SYLHY17National Natural Science Foundation of China 41876149Natural Science Foundation of Shandong Province ZR2021MD040Natural Science Foundation of Shandong Province ZR2023QD126The project of 'Double first-class' discipline construction fund 2023SYLHY08
6 · The paper itself

Abstract

Alkyl hydroperoxide reductase subunit C (AhpC) contributes to the cellular defense against reactive oxygen species. However, it remains understudied in psychrophiles. Amino acid comparison demonstrated that AhpC from Psychrobacter sp. ANT206 (ANT206) (PsAhpC) revealed fewer numbers of Lys and more numbers of Gly, which might have favored higher flexibility at low temperature. The recombinant PsAhpC (rPsAhpC) was most active at 25 °C and retained 35% of its residual activity at 0 °C, indicating that it was a cold-adapted enzyme. Additionally, rPsAhpC demonstrated significant salt tolerance, sustaining its activity in the presence of 4.0 M NaCl. Molecular dynamics simulations indicated that PsAhpC had comparatively loose conformation, which facilitated reactions at low temperatures. Subsequently, an ahpc knockout mutant was constructed, and the growth rate of the knockout mutant significantly decreased, suggesting that ahpc might be crucial for the growth of ANT206 at low temperatures. The findings provide a robust foundation for further investigation into the structural features and catalytic characterization of cold-adapted AhpC. The structural characteristics of PsAhpC and its cold tolerance and salt tolerance may be applied to stress resistance breeding of various organisms.

Indexed as

Cold TemperaturePeroxiredoxinsPsychrobacterAdaptation, PhysiologicalAmino Acid SequenceAntarctic RegionsBacterial ProteinsGene Knockout TechniquesMolecular Dynamics SimulationRecombinant ProteinsSalt ToleranceSodium ChlorideBacterial ProteinsPeroxiredoxinsRecombinant ProteinsSodium ChlorideAlkyl hydroperoxide reductase subunit CAntarcticCold-adaptationGene knockoutMolecular dynamics simulation

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.