Evidence map›Paper›PMID 39424139›Full record

ArticleThe Journal of biological chemistry2024

'GGFGGQ' repeats in Hfq of Acinetobacter baumannii are essential for nutrient utilization and virulence.

Abhiroop Sett, Pulak Kumar Maiti, Kritika Garg, Arsalan Hussain, Snehlata Saini, Shivam Pandey, Ranjana Pathania

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Abhiroop SettDepartment of Biosciences and Bioengineering, Indian Institute of Technology, Roorkee, Uttarakhand, India.
Pulak Kumar MaitiDepartment of Biosciences and Bioengineering, Indian Institute of Technology, Roorkee, Uttarakhand, India.
Kritika GargDepartment of Biosciences and Bioengineering, Indian Institute of Technology, Roorkee, Uttarakhand, India.
Arsalan HussainDepartment of Biosciences and Bioengineering, Indian Institute of Technology, Roorkee, Uttarakhand, India.
Snehlata SainiDepartment of Biosciences and Bioengineering, Indian Institute of Technology, Roorkee, Uttarakhand, India.
Shivam PandeyDepartment of Biosciences and Bioengineering, Indian Institute of Technology, Roorkee, Uttarakhand, India.
Ranjana PathaniaDepartment of Biosciences and Bioengineering, Indian Institute of Technology, Roorkee, Uttarakhand, India; Centre of Excellence in Disaster Mitigation and Management, Indian Institute of Technology, Roorkee, Uttarakhand, India. Electronic address: ranjana.pathania@bt.iitr.ac.in.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nosocomial pathogen Acinetobacter baumannii is known for causing lung and soft tissue infections in immunocompromised hosts. Its ability to adapt to various environments through post-transcriptional gene regulation is key to its success. Central to this regulation is the RNA chaperone Hfq, which facilitates interactions between mRNA targets and their small RNA partners through a Sm-core domain. Notably, the A. baumannii Hfq protein has a uniquely long C-terminal domain with "GGFGGQ" amino acid repeats and an acidic amino acid-rich C-terminal tip (C-tip). Previous research has shown the importance of the intact C-terminal domain for Hfq's functionality. Given the significance of the C-tip in Escherichia coli Hfq, we examined the pathophysiological roles of the redundant 'GGFGGQ' repeats along with the C-tip of A. baumannii Hfq. We constructed several variations of Hfq protein with fewer 'GGFGGQ' repeats while preserving the C-tip and variants with altered C-tip amino acid composition. We then studied their RNA interaction abilities and assessed the pathophysiological fitness and virulence of genome-complemented A. baumannii mutants. Our findings reveal that the redundancy of the 'GGFGGQ' repeats is crucial for Hfq's role in pathophysiological fitness and negatively impacts A. baumannii's virulence in a murine lung infection model. In addition, C-tip mutants exhibited a negative effect on both fitness and virulence, however, to a lesser extent than the other variants. These results underscore the importance of 'GGFGGQ' redundancy and acidic residues in Hfq's ribo-regulation and autoregulation, suggesting their critical role in establishing regulatory networks.

Indexed as

Acinetobacter baumanniiHost Factor 1 ProteinAcinetobacter InfectionsAnimalsBacterial ProteinsMiceRepetitive Sequences, Amino AcidVirulenceBacterial ProteinsHost Factor 1 Proteincellular energeticshfq acidic tipnon-coding small RNAspathophysiological fitnesspost-transcriptional regulation

Identifiers

PMID39424139
PMCPMC11617691

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.