Evidence map›Paper›PMID 39423215›Full record

ArticlePloS one2024

A transposable element prevents severe hemophilia B and provides insights into the evolution of new- and old world primates.

Johannes Kopp, Alice Rovai, Michael Ott, Heiner Wedemeyer, Andreas Tiede, Hans Jürgen Böhmer, Tomas Marques, Jörg Langemeier, Jens Bohne, Simon Alexander Krooss

Abstract read
In one paragraph

Article in PloS one, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Johannes KoppInstitute of Medical Genetics and Human Genetics, Charité -Universitätsmedizin Berlin, Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany.ORCID 0000-0002-0391-1497
Alice RovaiInstitute of Transfusion Medicine and Transplant Engineering, Hannover Medical School, Hannover, Germany.
Michael OttDepartment of Gastroenterology, Hepatology, Infection Diseases and Endocrinology, Hannover Medical School, Hannover, Germany.
Heiner WedemeyerDepartment of Gastroenterology, Hepatology, Infection Diseases and Endocrinology, Hannover Medical School, Hannover, Germany.
Andreas TiedeClinic for Hematology, Hemostaseology, Oncology and Stem Cell Transplantation, Hannover Medical School, Hannover, Germany.
Hans Jürgen BöhmerInstitute of Geobotany, Leibniz University Hannover, Hannover, Germany.ORCID 0000-0002-9176-4836
Tomas MarquesInstitut Biologica Evolutiva, Universitat Pompeu Fabra, Barcelona, Spain.
Jörg LangemeierInstitut Biologica Evolutiva, Universitat Pompeu Fabra, Barcelona, Spain.
Jens BohneInstitute of Virology, Hannover Medical School, Hannover, Germany.
Simon Alexander KroossDepartment of Gastroenterology, Hepatology, Infection Diseases and Endocrinology, Hannover Medical School, Hannover, Germany.ORCID 0000-0001-6372-395X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alu-elements comprise a large part of the human genome and some insertions have been shown to cause diseases. Here, we illuminate the protective role of an Alu-element in the 3'UTR of the human Factor 9 gene and its ability to ameliorate a poly(A) site mutation in a hemophilia B patient, preventing him from developing a severe disease. Using a minigene, we examined the disease-causing mutation and the modifying effect of the transposon in cellulo. Further, we simulated evolutionary scenarios regarding alternative polyadenylation before and after Alu insertion. A sequence analysis revealed that Old World monkeys displayed a highly conserved polyadenylation sites in this Alu-element, whereas New World monkeys lacked this motif, indicating a selective pressure. We conclude that this transposon has inserted shortly before the separation of Old and New World monkeys and thus also serves as a molecular landmark in primate evolution.

Indexed as

Alu ElementsEvolution, MolecularFactor IXHemophilia B3' Untranslated RegionsAnimalsCercopithecidaeDNA Transposable ElementsHumansMaleMutationPlatyrrhiniPolyadenylation3' Untranslated RegionsDNA Transposable ElementsFactor IX

Identifiers

PMID39423215
PMCPMC11488717

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.