Evidence map›Paper›PMID 39422099›Full record

ArticleVeterinary medicine and science2024

Elucidating genetic variability between randomly bred domestic cats and Persian domestic cats from different geographical locations using microsatellite markers.

Shirin Mahmoodi, Ali Hojabr Rajeoni, Mehrshad Zeinolabedini, Arash Javanmard, Mohammad Hossein Banabazi

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Article in Veterinary medicine and science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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3 · Its place in the literature

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1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Shirin MahmoodiNational Center of Genetic Resources, Agricultural Research Education and Extension Organization (AREEO), Tehran, Iran.ORCID 0009-0000-4918-6190
Ali Hojabr RajeoniDepartment of Microbiology and Immunology, Faculty of Veterinary Medicine, University of Tehran, Tehran, Iran.ORCID 0000-0002-8474-7536
Mehrshad ZeinolabediniDepartment of Genomic, Agricultural and Biotechnological Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREEO), Karaj, Iran.ORCID 0000-0002-3436-4334
Arash JavanmardDepartment of Animal Science, Faculty of Agriculture, University of Tabriz, Tabriz, Iran.ORCID 0000-0001-7998-9875
Mohammad Hossein BanabaziDepartment of Animal Breeding and Genetics (HGEN), Centre for Veterinary Medicine and Animal Science (VHC), Swedish University of Agricultural Sciences (SLU), Uppsala, Sweden.ORCID 0000-0002-7873-8123

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe domestic cat (Felis catus) is a newly evolved species in the family Felidae that has developed some great features among mammals. It is critical to conserve these species and prevent inbreeding from reducing their genetic diversity by understanding their genetic relationships and applying the information to breeding management. The diverse population was an excellent choice for studying genetic diversity and inbreeding phenomena.

objectivesTo conduct this research, 128 individuals from 8 populations, including Azerbaijan, Persian, Ahar, Uermia, Tehran, Karaj, Turkish and Shop cat (both genders), were randomly selected from different geographical regions. We selected eight STR markers with different chromosomal locations based on polymorphism and observed allele numbers in the next step. DNA extraction was performed using tail hair root, PCR and electrophoresis, and gel staining was performed according to routine laboratory protocol. For statistical analysis, CONVERT versions POPGENE, ARLEQUIN GenAlEx and R script analysis.

resultsRemarkably, our results showed that 23 alleles were identified in 128 samples. The highest number of alleles belonged to the FCa096 locus (eight alleles) in the Persian population, followed by FCa045 (seven alleles) in the Persian and Ahar populations. Another new finding is that the lowest number of alleles belonged to the 35 and FCa77 locus (two alleles). In addition, pairwise differentiation between and within populations was examined using the genetic distance index. Overall, the results showed that the degree of differentiation within the population is high in the Turkish population compared to other population groups and lower in the Azerbaijan population. In addition, principal component discriminant analysis-based analysis based on the ADAGENET package shows the distribution of samples by geographical location. The results show that genetic mixing between populations is high.

conclusionsOn this basis, we conclude that randomly bred domestic cats have a higher level of diversity than Persian domestic cats. This is an interesting topic for future work.

Indexed as

Genetic VariationMicrosatellite RepeatsAnimalsCatsFemaleIranMaleTurkeydomestic catgenetic variabilityinbreedingmicrosatellites

Identifiers

PMID39422099
PMCPMC11487337

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