Evidence map›Paper›PMID 39420923›Full record

ArticleBiomedical reports2024

Correlating tissue and plasma‑specific piRNA changes to predict their possible role in pancreatic malignancy and chronic inflammation.

Barsha Saha, Shouvik Chakravarty, Sukanta Ray, Hemabha Saha, Kshaunish Das, Indranil Ghosh, Bibekanand Mallick, Nidhan K Biswas, Srikanta Goswami

Abstract read
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Article in Biomedical reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

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0cells of the map it votes in
5citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Barsha SahaBiotechnology Research and Innovation Council-National Institute of Biomedical Genomics, Kalyani, Nadia, West Bengal 741251, India.
Shouvik ChakravartyBiotechnology Research and Innovation Council-National Institute of Biomedical Genomics, Kalyani, Nadia, West Bengal 741251, India.
Sukanta RayInstitute of Postgraduate Medical Education & Research, Kolkata 700020, India.
Hemabha SahaInstitute of Postgraduate Medical Education & Research, Kolkata 700020, India.
Kshaunish DasInstitute of Postgraduate Medical Education & Research, Kolkata 700020, India.
Indranil GhoshChittaranjan National Cancer Institute, Kolkata 700026, India.
Bibekanand MallickNational Institute of Technology, Rourkela 769008, India.
Nidhan K BiswasBiotechnology Research and Innovation Council-National Institute of Biomedical Genomics, Kalyani, Nadia, West Bengal 741251, India.
Srikanta GoswamiBiotechnology Research and Innovation Council-National Institute of Biomedical Genomics, Kalyani, Nadia, West Bengal 741251, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aggressiveness of pancreatic ductal adenocarcinoma is primarily due to lack of effective early detection biomarkers. Circulating non-coding RNAs serve as diagnostic or prognostic biomarkers in multiple types of cancer. Comparison of their expression between diseased tissue and relevant body fluids such as saliva, urine, bile, pancreatic juice, blood etc. may reveal mechanistic involvement of common non-coding RNAs. piwi-interacting RNAs (piRNAs) are a class of non-coding RNAs. The aim of the present study was to investigate plasma and tumour tissue piRNA changes in patients with pancreatic cancer (PC) and explore the possible role in tumorigenesis and pancreatic inflammation. Sequencing of circulating plasma small RNAs from patients with PC and chronic pancreatitis (CP) was performed and differentially expressed piRNAs were compared with those in tissues. Subsequent search for target genes for those piRNAs was performed followed by pathway and cluster analysis. A total of 36 piRNAs were shown to be deregulated in pancreatic tumour tissue and alteration of 11 piRNAs was detected in plasma of patients with PC. piRNAs hsa-piR-23246, hsa-piR-32858 and hsa-piR-9137 may serve a key role in PC development as their expression was correlated in both plasma and tumour tissue. Key piRNA-target interactions interfering with key biological pathways were also characterized. A total of 19 deregulated piRNAs in plasma samples of patients with CP was identified; these targeted genes responsible for chronic inflammation. Therefore, the present study provides a comprehensive description of piRNA alteration in pancreatic malignancy and inflammation; these may be explored for biomarker potential in future.

Indexed as

chronic pancreatitispancreatic ductal adenocarcinomapiRNAplasmatissue

Identifiers

PMID39420923
PMCPMC11484194

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