Evidence map›Paper›PMID 39420282›Full record

ArticleBMC infectious diseases2024

Comparative study of pathogen detection methods for central nervous system infections: laboratory testing of tuberculous meningitis.

Zengchen Liu, Xujie Zhu, Shengkun Zhang, Dapeng Li, Dian Wang, Yijie Wang, Yunyan Tang, Fangjia Tong, Wanzhen Xu, Guobao Li and 2 more

Erratum issuedAbstract readComparative Study
In one paragraph

Article in BMC infectious diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

Zengchen LiuDepartment of Neurosurgery, Shenzhen Third People's Hospital, Shenzhen, 518112, China.
Xujie ZhuCentral Laboratory, Longgang District Maternity & Child Healthcare Hospital of Shenzhen City (Longgang Maternity and Child Institute of Shantou University Medical College), Shenzhen, China.
Shengkun ZhangDepartment of Neurosurgery, Shenzhen Third People's Hospital, Shenzhen, 518112, China.
Dapeng LiThree Departments of Lung Diseases, Shenzhen Third People's Hospital, Shenzhen, Guangdong, 518112, China.
Dian WangDepartment of Neurosurgery, Shenzhen Third People's Hospital, Shenzhen, 518112, China.
Yijie WangDepartment of Neurosurgery, Shenzhen Third People's Hospital, Shenzhen, 518112, China.
Yunyan TangDepartment of Neurosurgery, Shenzhen Third People's Hospital, Shenzhen, 518112, China.
Fangjia TongPulmonary Diseases Departments (3), Shenzhen Third People's Hospital, Shenzhen, 518112, China.
Wanzhen XuDepartment of Neurosurgery, Shenzhen Third People's Hospital, Shenzhen, 518112, China.
Guobao LiThree Departments of Lung Diseases, Shenzhen Third People's Hospital, Shenzhen, Guangdong, 518112, China. l3gb06@aliyun.com.
Lanlan WeiPulmonary Diseases Departments (3), Shenzhen Third People's Hospital, Shenzhen, 518112, China. weilanlan@mail.sustech.edu.cn.
Ming ChuDepartment of Neurosurgery, Shenzhen Third People's Hospital, Shenzhen, 518112, China. chuming@mail.sustech.edu.cn.

Funding

Guangdong Provincial Department of Science and Technology 2023a1515220104Shenzhen Clinical Research Center for Tuberculosis 20210617141509001Shenzhen High-level Hospital Construction Fund NO.G22244G2001Shenzhen University High Level Clinical Special Project-Shenzhen Neurosurgery Specialist Training Pilot Base Promotion Project LCXKB202415
6 · The paper itself

Abstract

backgroundTuberculous meningitis (TBM) is a severe central nervous system (CNS) infection with a challenging diagnosis due to inadequate detection methods. This study evaluated current clinical detection methods and their applicability.

methodsA cohort of 514 CNS infection patients from 2018 to 2020 was studied. Data on general demographics, Cerebrospinal Fluid (CSF) analysis, epidemiology, and clinical outcomes were collected. TBM patients were identified, and the sensitivities of mmetagenomic next-generation sequencing (NGS), GeneXpert, and microbial culture were compared. Kappa statistic assessed the consistency between methods.

resultsAmong the patients involved, TBM (29%) and neurosyphilis (25%) were the two most prevalent CNS infections. CSF analysis indicated that 76% of patients had leukocytosis, suggesting a potential CNS inflammation. In TBM cases, 92.5% had elevated CSF protein and leukocyte counts. Moreover, the percentage of positive mNGS results was 55.6%. GeneXpert and MTB cultures alone had lower sensitivity, but combined use resulted in a 53.4% positive rate.

conclusionsThis study highlights the high sensitivity of mNGS, comparable to GeneXpert and MTB culture. The combined methods are cost-effective and straightforward, and can partially substitute for mNGS, offering valuable alternatives for TBM diagnosis and providing insights into multiple diagnostic strategies in clinical practice.

Indexed as

Mycobacterium tuberculosisSensitivity and SpecificityTuberculosis, MeningealAdultAgedCentral Nervous System InfectionsCohort StudiesFemaleHigh-Throughput Nucleotide SequencingHumansMaleMiddle AgedYoung AdultCNS infectionGeneXpertmNGSMTB cultureTBM

Identifiers

PMID39420282
PMCPMC11488244

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.