Evidence map›Paper›PMID 39420256›Full record

ArticleBMC cardiovascular disorders2024

Semi-supervised segmentation of cardiac chambers from LGE-CMR using feature consistency awareness.

Hairui Wang, Helin Huang, Jing Wu, Nan Li, Kaihao Gu, Xiaomei Wu

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Article in BMC cardiovascular disorders, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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2citing papers in PubMed
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2 citing papers in PubMed.

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5 · Who and what money

Authors and funding

6 authors.

Hairui WangDepartment of Biomedical Engineering, School of information Science and Technology, Fudan University, Shanghai, 200433, China.
Helin HuangDepartment of Biomedical Engineering, School of information Science and Technology, Fudan University, Shanghai, 200433, China.
Jing WuDepartment of Biomedical Engineering, School of information Science and Technology, Fudan University, Shanghai, 200433, China.
Nan LiDepartment of Biomedical Engineering, School of information Science and Technology, Fudan University, Shanghai, 200433, China.
Kaihao GuDepartment of Biomedical Engineering, School of information Science and Technology, Fudan University, Shanghai, 200433, China. kaihaogu@aliyun.com.
Xiaomei WuDepartment of Biomedical Engineering, School of information Science and Technology, Fudan University, Shanghai, 200433, China. xiaomeiwu@fudan.edu.cn.

Funding

Medical Engineering Fund of Fudan University yg2021-38National Key Research and Development Program 2021YFC2400203Shanghai Municipal Commission of Economy and Information Technology GYQJ-2018-2-05
6 · The paper itself

Abstract

backgroundLate gadolinium enhancement cardiac magnetic resonance imaging (LGE-CMR) is a valuable cardiovascular imaging technique. Segmentation of cardiac chambers from LGE-CMR is a fundamental step in electrophysiological modeling and cardiovascular disease diagnosis. Deep learning methods have demonstrated extremely promising performance. However, excellent performance often depended on a large amount of finely annotated data. The purpose of this manuscript was to develop a semi-supervised segmentation method to use unlabeled data to improve model performance.

methodsThis manuscript proposed a semi-supervised network that integrates triple-consistency constraints (data-level, task-level, and feature-level) for cardiac chambers segmentation from LGE-CMR. Specifically, we designed a network that integrated segmentation and edge prediction tasks based on the mean teacher architecture. This addressed the problem of ignoring some challenging regions because of excluding low-confidence regions of previous research. We also applied a voxel-level contrastive learning strategy to achieve feature-level consistency, helping the model pay attention to the consistency between features overlooked in previous research.

resultsIn terms of the Dice, Jaccard, Average Surface Distance (ASD), and 95% Hausdorff Distance (95HD) metrics, for the atrial segmentation dataset, the proposed method achieved scores of 88.34%, 79.30%, 7.92, and 2.02 when trained with 10% labeled data, and 90.70%, 83.09%, 6.41, and 1.72 when trained with 20% labeled data. For the ventricular segmentation task, the results were 87.22%, 77.95%, 2.27, and 0.61 with 10% labeled data, and 88.99%, 80.45%, 1.87, and 0.51 with 20% labeled data, respectively.

conclusionExperiments demonstrated that our method outperforms previous semi-supervised methods, showing the potential of the proposed network for semi-supervised segmentation problems.

Indexed as

Contrast MediaDeep LearningImage Interpretation, Computer-AssistedPredictive Value of TestsDatabases, FactualHeart DiseasesHumansMagnetic Resonance ImagingMagnetic Resonance Imaging, CineReproducibility of ResultsSupervised Machine LearningContrast MediaConsistencyContrastive learningLGE-CMRSegmentationSemi-supervised learning

Identifiers

PMID39420256
PMCPMC11484209

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.