Evidence map›Paper›PMID 39419548›Full record

ArticleLife science alliance2025

Direct visualization of emergent metastatic features within an ex vivo model of the tumor microenvironment.

Libi Anandi, Jeremy Garcia, Manon Ros, Libuše Janská, Josephine Liu, Carlos Carmona-Fontaine

Abstract read
In one paragraph

Article in Life science alliance, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Libi AnandiCenter for Genomics & Systems Biology, Department of Biology, New York University, New York, NY, USA.
Jeremy GarciaCenter for Genomics & Systems Biology, Department of Biology, New York University, New York, NY, USA.
Manon RosCenter for Genomics & Systems Biology, Department of Biology, New York University, New York, NY, USA.ORCID 0000-0001-7878-3613
Libuše JanskáCenter for Genomics & Systems Biology, Department of Biology, New York University, New York, NY, USA.ORCID 0000-0002-7695-9686
Josephine LiuCenter for Genomics & Systems Biology, Department of Biology, New York University, New York, NY, USA.
Carlos Carmona-FontaineCenter for Genomics & Systems Biology, Department of Biology, New York University, New York, NY, USA cf97@nyu.edu.ORCID 0000-0002-5238-6852

Funding

Decoding the fundamental mechanisms of tumor emergence and evolutionDP2CA250005 · NCI · NEW YORK UNIVERSITY · PI CARMONA-FONTAINE, CARLOS · 2019 to 2019
$2.4M
The Quantitative Biological Systems Training (QBIST) ProgramT32GM132037 · NIGMS · NEW YORK UNIVERSITY · PI David Gresham, Christine Vogel · 2019 to 2026
$2.3M
NCI NIH HHS DP2 CA250005NIGMS NIH HHS T32 GM132037
6 · The paper itself

Abstract

Ischemic conditions such as hypoxia and nutrient starvation, together with interactions with stromal cells, are critical drivers of metastasis. These conditions arise deep within tumor tissues, and thus, observing nascent metastases is exceedingly challenging. We thus developed the 3MIC-an ex vivo model of the tumor microenvironment-to study the emergence of metastatic features in tumor cells in a 3-dimensional (3D) context. Here, tumor cells spontaneously create ischemic-like conditions, allowing us to study how tumor spheroids migrate, invade, and interact with stromal cells under different metabolic conditions. Consistent with previous data, we show that ischemia increases cell migration and invasion, but the 3MIC allowed us to directly observe and perturb cells while they acquire these pro-metastatic features. Interestingly, our results indicate that medium acidification is one of the strongest pro-metastatic cues and also illustrate using the 3MIC to test anti-metastatic drugs on cells experiencing different metabolic conditions. Overall, the 3MIC can help dissecting the complexity of the tumor microenvironment for the direct observation and perturbation of tumor cells during the early metastatic process.

Indexed as

Cell MovementNeoplasm MetastasisSpheroids, CellularTumor MicroenvironmentCell Line, TumorHumansNeoplasm InvasivenessNeoplasmsStromal Cells

Identifiers

PMID39419548
PMCPMC11487089

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.