Evidence map›Paper›PMID 39417885›Full record

ArticleArchives of virology2024

Molecular characterization of a novel fusarivirus infecting the plant-pathogenic fungus Nigrospora sphaerica.

Xun Lu, Jianhua Lu, Shuming Peng, Qingzhu Xia, Le Li, Binqing Long, Hong Liu

Abstract read
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In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xun LuAgricultural Science Academy of XiangXi Tujia and Miao Autonmous Prefecture, Jishou, China.
Jianhua LuAgricultural Science Academy of XiangXi Tujia and Miao Autonmous Prefecture, Jishou, China.
Shuming PengAgricultural Science Academy of XiangXi Tujia and Miao Autonmous Prefecture, Jishou, China.
Qingzhu XiaAgricultural Science Academy of XiangXi Tujia and Miao Autonmous Prefecture, Jishou, China.
Le LiAgricultural Science Academy of XiangXi Tujia and Miao Autonmous Prefecture, Jishou, China.
Binqing LongAgricultural Science Academy of XiangXi Tujia and Miao Autonmous Prefecture, Jishou, China.
Hong LiuCollege of Forestry, Central South University of Forestry and Technology, Changsha, China. liuhong@csuft.edu.cn.ORCID http://orcid.org/0009-0006-4999-6656

Funding

Innovation Foundation of Youth Science and Technology XXNK202445National Science Foundation of Hunan Province 2024JJ4098Research Foundation of Education Bureau of Hunan Province 23B0256
6 · The paper itself

Abstract

Here, we describe a novel mycovirus, tentatively designated as "Nigrospora sphaerica fusarivirus 2" (NsFV2), which was isolated from the phytopathogenic fungus Nigrospora sphaerica strain HNXX-Ns20. NsFV2 has a single-stranded positive-sense RNA (+ ssRNA) genome of 6,156 nucleotides, excluding the poly(A) tail, and contains two putative open reading frames (ORFs). ORF1 encodes a large polypeptide of 1,509 amino acids (aa) containing a conserved RNA-dependent RNA polymerase (RdRp) domain and a viral helicase domain. The ORF1-encoded polypeptide shares 29.40-68.48% sequence identity with other fusariviruses and shares the highest sequence identity (68.48%) with Nigrospora sphaerica fusarivirus 1 (NsFV1). The small ORF2 encodes a polypeptide of 483 aa that contains a conserved chromosome segregation ATPase (Smc) domain. Multiple sequence alignments and phylogenetic analysis based on the ORF1-encoded polypeptide indicated that NsFV2 should be considered a new member of the genus Alphafusarivirus of the family Fusariviridae.

Indexed as

AscomycotaFungal VirusesGenome, ViralOpen Reading FramesPhylogenyPlant DiseasesAmino Acid SequenceRNA-Dependent RNA PolymeraseRNA, ViralRNA VirusesSequence AlignmentViral ProteinsRNA-Dependent RNA PolymeraseRNA, ViralViral Proteins

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.