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ArticlePlant cell reports2024

Genome-wide identification of Aux/IAA gene family members in grape and functional analysis of VaIAA3 in response to cold stress.

Shixiong Lu, Min Li, Yongjuan Cheng, Huimin Gou, Lili Che, Guoping Liang, Juan Mao

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Article in Plant cell reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
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1 · What the graph read from it

What it found

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Genome-Wide Identification and Expression Profiling of theInternational journal of molecular sciences · 2025
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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Shixiong Lu *College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Min Li *College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Yongjuan ChengCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Huimin GouCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Lili CheCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Guoping LiangCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Juan MaoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China. maojuan@gsau.edu.cn.ORCID http://orcid.org/0000-0003-4906-7938

Funding

FuXi Foundation of Gansu Agricultural University No. Ganfx-03J02Key Project of Natural Science Foundation of Gansu Province 22JR5RA831
6 · The paper itself

Abstract

key messageTwenty-five VvIAA genes and eighteen VaIAA genes were identified from Pinot Noir and Shanputao, respectively. The overexpression of VaIAA3 in transgenic Arabidopsis increased cold tolerance by regulating auxin, ABA and ethylene signaling. Aux/IAA genes are key genes involved in regulating auxin signal transduction in plants. Although IAA genes have been characterized in various plant species, the role of IAA genes in grape cold resistance is unclear. To further explore the members of the Aux/IAA gene family in grape and their functions, in this study, using genomic data for Pinot Noir (Vitis vinifera cv. 'Pinot Noir') and Shanputao (Vitis amurensis), 25 VvIAA genes and 18 VaIAA genes were identified. The VaIAA genes presented different expression patterns at five different temperatures (28 ± 1 °C, 5 ± 1 °C, 0 ± 1 °C, -5 ± 1 °C, and -10 ± 1 °C) according to qRT‑PCR results. VaIAA3 was selected as a candidate gene for further functional analysis because of its high expression level under low-temperature stress. Subcellular localization experiments revealed that VaIAA3 was localized in the nucleus. Additionally, under 4 °C treatment for 24 h, relative expression level of VaIAA3, antioxidant enzyme activity, survival rate, and cold-responsive gene expression in three transgenic lines (OE-1, OE-2, OE-3) were greater, whereas relative electrolytic conductivity (REC), malondialdehyde (MDA) content and hydrogen peroxide (H

Indexed as

ArabidopsisCold-Shock ResponseGene Expression Regulation, PlantIndoleacetic AcidsPlant ProteinsPlants, Genetically ModifiedVitisAbscisic AcidCold TemperatureEthylenesMultigene FamilyPhylogenyPlant Growth RegulatorsAbscisic AcidethyleneEthylenesIndoleacetic AcidsPlant Growth RegulatorsPlant ProteinsArabidopsis thalianaAux/IAA gene familyCold stressExpression analysisVaIAA3 gene

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.