Evidence map›Paper›PMID 39417657›Full record

ArticleJournal of the American Society for Mass Spectrometry2024

Charging of DNA Complexes in Positive-Mode Native Electrospray Ionization Mass Spectrometry.

Mia L Abramsson, Louise J Persson, Frank Sobott, Erik G Marklund, Michael Landreh

Abstract read
In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Mia L AbramssonDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 65 Solna, Sweden.ORCID 0000-0002-8184-0145
Louise J PerssonDepartment of Chemistry - BMC, Uppsala University, 751 23, Uppsala, Sweden.
Frank SobottAstbury Centre for Structural Molecular Biology, School of Molecular and Cellular Biology, Faculty of Biological Sciences, University of Leeds, LS2 9JT Leeds, U.K.ORCID 0000-0001-9029-1865
Erik G MarklundDepartment of Chemistry - BMC, Uppsala University, 751 23, Uppsala, Sweden.ORCID 0000-0002-9804-5009
Michael LandrehDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 171 65 Solna, Sweden.ORCID 0000-0002-7958-4074

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Native mass spectrometry (nMS) provides insights into the structures and dynamics of biomacromolecules in their native-like states by preserving noncovalent interactions through "soft" electrospray ionization (ESI). For native proteins, the number of charges that are acquired scales with the surface area and mass. Here, we explore the effect of highly negatively charged DNA on the ESI charge of protein complexes and find a reduction of the mass-to-charge ratio as well as a greater variation. The charge state distributions of pure DNA assemblies show a lower mass-to-charge ratio than proteins due to their greater density in the gas phase, whereas the charge of protein-DNA complexes can additionally be influenced by the distribution of the ESI charges, ion pairing events, and collapse of the DNA components. Our findings suggest that structural features of protein-DNA complexes can result in lower charge states than expected for proteins.

Indexed as

DNASpectrometry, Mass, Electrospray IonizationProteinsDNAProteinscharge state distributionelectrospray ionizationprotein−DNA complex

Identifiers

PMID39417657
PMCPMC11622369

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.