Evidence map›Paper›PMID 39416790›Full record

ArticleFrontiers in immunology2024

Profiling hypoxia signaling reveals a lncRNA signature contributing to immunosuppression in high-grade glioma.

Xinqiao Li, Jingcheng Xu, Xue Li, Jianghua Shi, Chunmi Wei, Qingyu Liang

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Article in Frontiers in immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Xinqiao Li *Department of Neurosurgery, The First Hospital of China Medical University, Shenyang, Liaoning, China.
Jingcheng Xu *Department of Neurosurgery, The First Hospital of China Medical University, Shenyang, Liaoning, China.
Xue Li *International Department, The First Hospital of China Medical University, Shenyang, Liaoning, China.
Jianghua ShiDepartment of Neurosurgery, The First Hospital of China Medical University, Shenyang, Liaoning, China.
Chunmi WeiDepartment of Radiotherapy, The Affiliated Tumor Hospital of Guangxi Medical University, Nanning, Guangxi, China.
Qingyu LiangDepartment of Neurosurgery, The First Hospital of China Medical University, Shenyang, Liaoning, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Hypoxic conditions in glioma are linked to tumor aggressiveness, poor prognosis, and treatment resistance. Long non-coding RNAs (lncRNAs) play key roles in the hypoxic and immune microenvironment of cancers, but their link to hypoxia-induced immunosuppression in high-grade glioma (HGG) is not well-studied. Methods: Gene expression profiles from TCGA and CGGA, along with clinical and genomic data, were analyzed. Bioinformatics methods including Consensus Clustering, Pearson correlation, and Cox regression analyses were used. Cell proliferation was assessed using cell counting kit-8 and colony formation assays. Glioma-macrophage interactions were evaluated using a co-culture model. Results: Hypoxia subtype clustering showed hypoxic stress correlates with worse HGG prognosis. Eight hypoxia-related lncRNAs (AP000695.4, OSMR-AS1, AC078883.3, RP11-545E17.3, LINC01057, LINC01503, TP73-AS1, and LINC00672) with prognostic value were identified, forming a risk signature that separated patients into distinct prognostic groups. Multivariate Cox regression confirmed the signature as an independent prognostic factor. High-risk patients had greater hypoxia, leading to an immunosuppressive environment and immunotherapy resistance via tumor-associated macrophages (TAMs). TP73-AS1 significantly influenced hypoxia-induced TAM infiltration and M2 polarization. Conclusions: We profiled hypoxic stress in HGG and developed an 8-lncRNA hypoxia-related signature predicting patient survival and immunotherapy response, emphasizing its role in hypoxia-induced immunosuppression.

Indexed as

Brain NeoplasmsGene Expression Regulation, NeoplasticGliomaRNA, Long NoncodingTumor MicroenvironmentCell Line, TumorFemaleGene Expression ProfilingHumansHypoxiaImmune ToleranceMaleNeoplasm GradingPrognosisSignal TransductionTranscriptomeRNA, Long Noncodinghigh-grade gliomahypoxiaimmunotherapylncRNAprognosis

Identifiers

PMID39416790
PMCPMC11479907

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.