Evidence map›Paper›PMID 39415611›Full record

ArticleThe New phytologist2024

CHUP1 restricts chloroplast movement and effector-triggered immunity in epidermal cells.

Alexander O Nedo, Huining Liang, Jaya Sriram, Md Abdur Razzak, Jung-Youn Lee, Chandra Kambhamettu, Savithramma P Dinesh-Kumar, Jeffrey L Caplan

Abstract read
In one paragraph

Article in The New phytologist, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Genomic Insights into Winter Wheat Breeding for Severely Cold Climates.International journal of molecular sciences · 2026
    Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Alexander O NedoDepartment of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA.ORCID 0000-0002-0824-315X
Huining LiangDepartment of Computer & Information Sciences, University of Delaware, Newark, DE, 19716, USA.ORCID 0009-0000-9781-2651
Jaya SriramDepartment of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA.
Md Abdur RazzakDepartment of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA.ORCID 0000-0002-2576-8142
Jung-Youn LeeDepartment of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA.ORCID 0000-0003-4604-7974
Chandra KambhamettuDepartment of Computer & Information Sciences, University of Delaware, Newark, DE, 19716, USA.ORCID 0000-0001-5306-3994
Savithramma P Dinesh-KumarDepartment of Plant Biology and The Genome Center, College of Biological Sciences, University of California, Davis, CA, 95616, USA.ORCID 0000-0001-5738-316X
Jeffrey L CaplanDepartment of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA.ORCID 0000-0002-3991-0912

Funding

Predictive Modeling & Optimal Control Framework for Model-Based Epidemic Response in DelawareP20GM103446 · NIGMS · UNIVERSITY OF DELAWARE · PI MELINDA K DUNCAN · 2012 to 2026
$67.2M
Understanding synovial macrophage inflamm-aging within osteoarthritisP20GM139760 · NIGMS · UNIVERSITY OF DELAWARE · PI DAWN M ELLIOTT · 2021 to 2026
$19.1M
Role of organelle dynamics and retrograde signaling during plant innate immunityR01GM132582 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CAPLAN, JEFFREY L, DINESH-KUMAR, SAVITHRAMMA P · 2019 to 2022
$1.9M
Data Management and Storage System for Shared Resource FacilitiesS10OD028725 · OD · UNIVERSITY OF DELAWARE · PI POLSON, SHAWN W · 2021 to 2021
$600k
Spinning Disk Confocal and Single Molecule Localization MicroscopeS10OD030321 · OD · UNIVERSITY OF DELAWARE · PI CAPLAN, JEFFREY L · 2021 to 2021
$562k
Zeiss LSM710 Inverted Confocal MicroscopeS10OD016361 · OD · UNIVERSITY OF DELAWARE · PI CAPLAN, JEFFREY L · 2015 to 2015
$444k
Division of Integrative Organismal Systems IOS 2054685NIGMS NIH HHS P20 GM103446NIGMS NIH HHS P20 GM139760NIGMS NIH HHS R01 GM132582NIGMS NIH HHS S10 OD016361NIGMS NIH HHS S10 OD028725NIGMS NIH HHS S10 OD030321NIH HHS S10 OD016361NIH HHS S10 OD028725NIH HHS S10 OD030321
6 · The paper itself

Abstract

Chloroplast Unusual Positioning 1 (CHUP1) plays an important role in the chloroplast avoidance and accumulation responses in mesophyll cells. In epidermal cells, prior research showed silencing CHUP1-induced chloroplast stromules and amplified effector-triggered immunity (ETI); however, the underlying mechanisms remain largely unknown. CHUP1 has a dual function in anchoring chloroplasts and recruiting chloroplast-associated actin (cp-actin) filaments for blue light-induced movement. To determine which function is critical for ETI, we developed an approach to quantify chloroplast anchoring and movement in epidermal cells. Our data show that silencing NbCHUP1 in Nicotiana benthamiana plants increased epidermal chloroplast de-anchoring and basal movement but did not fully disrupt blue light-induced chloroplast movement. Silencing NbCHUP1 auto-activated epidermal chloroplast defense (ECD) responses including stromule formation, perinuclear chloroplast clustering, the epidermal chloroplast response (ECR), and the chloroplast reactive oxygen species (ROS), hydrogen peroxide (H

Indexed as

ChloroplastsNicotianaPlant EpidermisPlant ImmunityArabidopsis ProteinsGene Expression Regulation, PlantGene SilencingHydrogen PeroxideLightMovementPlant ProteinsReactive Oxygen SpeciesArabidopsis ProteinsHydrogen PeroxidePlant ProteinsReactive Oxygen Specieschloroplast movementChloroplast Unusual Positioning 1 (CHUP1)effector‐triggered immunity (ETI)epidermal chloroplast defense (ECD)epidermal chloroplast response (ECR)phototropin 2 (phot2)reactive oxygen speciesstromules

Identifiers

PMID39415611
PMCPMC11583462

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.