Evidence map›Paper›PMID 39415088›Full record

ArticleBMC plant biology2024

Physiological, biochemical, and transcriptomic alterations in Castor (Ricinus communis L.) under polyethylene glycol-induced oxidative stress.

Yong Zhao, Pei Lei, Huibo Zhao, Rui Luo, Guorui Li, Jianjun Di, Li Wen, Zhibiao He, Deyun Tan, Fanjuan Meng and 1 more

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Yong Zhao *College of Life Science, Baicheng Normal University, Baicheng, 137000, China.
Pei Lei *College of Forestry and Grassland Science, Jilin Agricultural University, Jilin, 130118, China.
Huibo ZhaoCollege of Life Science and Food, Inner Mongolia Minzu University, Tongliao, 028000, China.
Rui LuoCollege of Life Science and Food, Inner Mongolia Minzu University, Tongliao, 028000, China.
Guorui LiCollege of Life Science and Food, Inner Mongolia Minzu University, Tongliao, 028000, China.
Jianjun DiCollege of Life Science and Food, Inner Mongolia Minzu University, Tongliao, 028000, China.
Li WenCollege of Life Science, Baicheng Normal University, Baicheng, 137000, China.
Zhibiao HeTongliao Agricultural Science Research Institute, Tongliao, 028043, China.
Deyun TanZibo Agricultural Science Research Institute, Zibo, 255000, China.
Fanjuan MengCollege of Forestry and Grassland Science, Jilin Agricultural University, Jilin, 130118, China. mfj19751@163.com.
Fenglan HuangCollege of Life Science and Food, Inner Mongolia Minzu University, Tongliao, 028000, China. huangfenglan@imun.edu.cn.

Funding

the Inner Mongolia Autonomous Region Grassland Talent Innovation Team 2022the Natural Science Foundation of Jilin Province YDZJ202201ZYTS453
6 · The paper itself

Abstract

backgroundCastor is an important industrial raw material. Drought-induced oxidative stress leads to slow growth and decreased yields in castor. However, the mechanisms of drought-induced oxidative stress in castor remain unclear. Therefore, in this study, physiological, biochemical, and RNA-seq analyses were conducted on the roots of castor plants under PEG-6000 stress for 3 d and 7 d followed by 4 d of hydration.

resultsThe photosynthetic rate of castor leaves was inhibited under PEG-6000 stress for 3 and 7 d. Biochemical analysis of castor roots stressed for 3 d and 7 d, and rehydrated for 4 d revealed that the activities of APX and CAT were highest after only 3 d of stress, whereas the activities of POD, GR, and SOD peaked after 7 d of stress. RNA-seq analysis revealed 2926, 1507, and 111 differentially expressed genes (DEGs) in the roots of castor plants under PEG-6000 stress for 3 d and 7 d and after 4 d of rehydration, respectively. GO analysis of the DEGs indicated significant enrichment in antioxidant activity. Furthermore, KEGG enrichment analysis of the DEGs revealed significantly enriched metabolic pathways, including glutathione metabolism, fatty acid metabolism, and plant hormone signal transduction. WGCNA identified the core genes PP2C39 and GA2ox4 in the navajowhite1 module, which was upregulated under PEG-6000 stress. On the basis of these results, we propose a model for the response to drought-induced oxidative stress in castor.

conclusionsThis study provides valuable antioxidant gene resources, deepening our understanding of antioxidant regulation and paving the way for further molecular breeding of castor plants.

Indexed as

Oxidative StressPolyethylene GlycolsTranscriptomeAntioxidantsDroughtsGene Expression ProfilingGene Expression Regulation, PlantPhotosynthesisPlant LeavesPlant RootsRicinusRicinus communisAntioxidantsPolyethylene Glycol 6000Polyethylene GlycolsCastorPEG stressRNA-seq

Identifiers

PMID39415088
PMCPMC11484386

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.