Evidence map›Paper›PMID 39413785›Full record

ArticleMed (New York, N.Y.)2025

Host genetic and immune factors drive evasion of HIV-1 pathogenesis in viremic non-progressors.

Ángel Bayón-Gil, Inmaculada Hernández, Judith Dalmau, Juan C Nieto, Víctor Urrea, Lidia Garrido-Sanz, Ginevra Caratú, Maria C García-Guerrero, Cristina Gálvez, María Salgado and 14 more

Abstract read
In one paragraph

Article in Med (New York, N.Y.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. The elite controller phenotype.Current opinion in HIV and AIDS · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors.

Ángel Bayón-GilIrsiCaixa, Badalona, Spain.
Inmaculada HernándezSingle Cell Genomics Group, CNAG-CRG, National Centre for Genomic Analysis (CNAG), Barcelona, Spain.
Judith DalmauIrsiCaixa, Badalona, Spain.
Juan C NietoSingle Cell Genomics Group, CNAG-CRG, National Centre for Genomic Analysis (CNAG), Barcelona, Spain.
Víctor UrreaIrsiCaixa, Badalona, Spain.
Lidia Garrido-SanzIrsiCaixa, Badalona, Spain.
Ginevra CaratúSingle Cell Genomics Group, CNAG-CRG, National Centre for Genomic Analysis (CNAG), Barcelona, Spain.
Maria C García-GuerreroIrsiCaixa, Badalona, Spain.
Cristina GálvezIrsiCaixa, Badalona, Spain.
María SalgadoIrsiCaixa, Badalona, Spain; Germans Trias i Pujol Research Institute, Badalona, Spain; CIBERINFEC, Instituto de Salud Carlos III, Madrid, Spain.
Itziar ErkiziaIrsiCaixa, Badalona, Spain.
Fernando LaguíaIrsiCaixa, Badalona, Spain.
Patricia Resa-InfanteIrsiCaixa, Badalona, Spain; Germans Trias i Pujol Research Institute, Badalona, Spain; CIBERINFEC, Instituto de Salud Carlos III, Madrid, Spain; Infectious Diseases and Immunity Department, University of Vic-Central University of Catalonia, Vic, Spain.
Marta MassanellaIrsiCaixa, Badalona, Spain; CIBERINFEC, Instituto de Salud Carlos III, Madrid, Spain.
Raúl TondaCNAG-CRG, National Centre for Genomic Analysis (CNAG), Barcelona, Spain.
Jordi MorataCNAG-CRG, National Centre for Genomic Analysis (CNAG), Barcelona, Spain.
Kai Ying HongThe Wistar Institute, Philadelphia, PA, USA.
Jane KoshyThe Wistar Institute, Philadelphia, PA, USA.
Aaron R GoldmanThe Wistar Institute, Philadelphia, PA, USA.
Leila GironThe Wistar Institute, Philadelphia, PA, USA.
Mohamed Abdel-MohsenThe Wistar Institute, Philadelphia, PA, USA.
Holger HeynSingle Cell Genomics Group, CNAG-CRG, National Centre for Genomic Analysis (CNAG), Barcelona, Spain.
Javier Martinez-PicadoIrsiCaixa, Badalona, Spain; Germans Trias i Pujol Research Institute, Badalona, Spain; CIBERINFEC, Instituto de Salud Carlos III, Madrid, Spain; Infectious Diseases and Immunity Department, University of Vic-Central University of Catalonia, Vic, Spain; ICREA, Catalan Institution for Research and Advanced Studies, Barcelona, Spain. Electronic address: jmpicado@irsicaixa.es.
Maria C PuertasIrsiCaixa, Badalona, Spain; Germans Trias i Pujol Research Institute, Badalona, Spain; CIBERINFEC, Instituto de Salud Carlos III, Madrid, Spain. Electronic address: mcpuertas@irsicaixa.es.

Funding

Tumor Microenvironment and MetastasisP30CA010815 · NCI · WISTAR INSTITUTE · PI Aaron Robert Goldman · 1985 to 2026
$75.9M
Reversing Immune Dysfunction for HIV-1 EradicationUM1AI164561 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI SUMIT K CHANDA, Paula M Cannon · 2021 to 2026
$30.0M
MultiOMICS to uncover immune and virological mechanisms that drive HIV DNA decay, restore immune homeostasis, and promote HIV specific immunity in PWH receiving cell therapies.P01AI178376 · NIAID · EMORY UNIVERSITY · PI Rafick Pierre Sekaly · 2023 to 2026
$6.1M
Purchase of a Q Exactive HF mass spectrometer system for metabolomicsS10OD023586 · OD · WISTAR INSTITUTE · PI SPEICHER, DAVID W. · 2017 to 2017
$600k
NCI NIH HHS P30 CA010815NIAID NIH HHS P01 AI178376NIAID NIH HHS UM1 AI164561NIH HHS S10 OD023586
6 · The paper itself

Abstract

backgroundViremic non-progressors (VNPs) represent an exceptional and uncommon subset of people with HIV-1, characterized by the remarkable preservation of normal CD4

methodsWe implemented a novel single-cell and multiomics approach to comprehensively characterize viral, genomic, transcriptomic, and metabolomic factors driving this exceedingly rare disease phenotype in 16 VNPs and 29 HIV+ progressors.

findingsGenetic predisposition to the VNP phenotype was evidenced by a higher prevalence of CCR5Δ32 heterozygosity, which was associated with lower levels of CCR5 expression and a lower frequency of infected cells in peripheral circulation. We also observed reduced levels of plasma markers of intestinal disruption and attenuated interferon responses in VNPs. These factors potentially drive the other phenotypic traits of immune preservation in this population, including the unaltered tryptophan metabolic profile, reduced activation of cytotoxic lymphocytes, and reduced bystander CD4

conclusionsIn summary, our comprehensive analysis identified intricate factors collectively associated with the unique immunovirological equilibrium in VNPs, shedding light on potential avenues for therapeutic exploration in managing HIV pathogenesis.

fundingThe work was supported by funding from the Spanish Ministry of Science and Innovation and the National Institutes of Health (NIH).

Indexed as

HIV-1HIV InfectionsImmune EvasionViremiaAdultCD4-Positive T-LymphocytesFemaleGenetic Predisposition to DiseaseHumansMaleMiddle AgedReceptors, CCR5CCR5 protein, humanReceptors, CCR5CCR5CTL activationHIV-1 pathogenesisHIV reservoirinterferonsingle-cell RNA sequencingTranslation to patientstryptophanviremic non-progressorVNPzonulin

Identifiers

PMID39413785
PMCPMC11830539

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.