Evidence map›Paper›PMID 39413779›Full record

ArticleCell reports methods2024

Cryosectioning and immunofluorescence of C. elegans reveals endogenous polyphosphate in intestinal endo-lysosomal organelles.

Ellen Quarles, Lauren Petreanu, Anjali Narain, Aanchal Jain, Akash Rai, Joyful Wang, Bryndon Oleson, Ursula Jakob

Abstract read
In one paragraph

Article in Cell reports methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ellen QuarlesUniversity of Michigan, Molecular, Cellular, and Developmental Biology Department, Ann Arbor, MI, USA. Electronic address: equarles@gmail.com.
Lauren PetreanuUniversity of Michigan, Molecular, Cellular, and Developmental Biology Department, Ann Arbor, MI, USA.
Anjali NarainUniversity of Michigan, Molecular, Cellular, and Developmental Biology Department, Ann Arbor, MI, USA.
Aanchal JainUniversity of Michigan, Molecular, Cellular, and Developmental Biology Department, Ann Arbor, MI, USA.
Akash RaiUniversity of Michigan, Molecular, Cellular, and Developmental Biology Department, Ann Arbor, MI, USA.
Joyful WangUniversity of Michigan, Molecular, Cellular, and Developmental Biology Department, Ann Arbor, MI, USA.
Bryndon OlesonUniversity of Michigan, Molecular, Cellular, and Developmental Biology Department, Ann Arbor, MI, USA.
Ursula JakobUniversity of Michigan, Molecular, Cellular, and Developmental Biology Department, Ann Arbor, MI, USA.

Funding

Role of Molecular Chaperones in Stress Response and DiseaseR35GM122506 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Ursula H. Jakob · 2017 to 2026
$6.8M
NIGMS NIH HHS R35 GM122506
6 · The paper itself

Abstract

Polyphosphate (polyP) is a ubiquitous polyanion present throughout the tree of life. While polyP's widely varied functions have been interrogated in single-celled organisms, little is known about the cellular distribution and function of polyP in multicellular organisms. To study polyP in metazoans, we developed the nematode Caenorhabditis elegans as a model system. We designed a high-throughput, longitudinal-orientation cryosectioning method that allowed us to scrutinize the intracellular localization of polyP in fixed C. elegans using fluorescent polyP probes and co-immunostaining targeting appropriate marker proteins. We discovered that the vast majority of polyP is localized within the endo-lysosomal compartments of the intestinal cells and is highly sensitive toward the disruption of endo-lysosomal compartment generation and food availability. This study lays the groundwork for further mechanistic research of polyPs in multicellular organisms and provides a reliable method for immunostaining hundreds of fixed worms in a single experiment.

Indexed as

Caenorhabditis elegansLysosomesPolyphosphatesAnimalsCaenorhabditis elegans ProteinsCryoultramicrotomyEndosomesFluorescent Antibody TechniqueIntestinesCaenorhabditis elegans ProteinsPolyphosphatesCaenorhabditis elegansCP: Cell biologyCP: Imagingcryosectioncuticleendosomefreeze-crackimmunofluorescence staininglysosomepolyphosphatetissue sectioning

Identifiers

PMID39413779
PMCPMC11573743

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.