Evidence map›Paper›PMID 39413208›Full record

ArticleNucleic acids research2024

SNF2L suppresses nascent DNA gap formation to promote DNA synthesis.

Anthony Nelligan, Huzefa Dungrawala

Abstract read
In one paragraph

Article in Nucleic acids research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Anthony NelliganDepartment of Molecular Biosciences, University of South Florida, Tampa, FL 33620, USA.
Huzefa DungrawalaDepartment of Molecular Biosciences, University of South Florida, Tampa, FL 33620, USA.ORCID 0000-0003-1868-7923

Funding

Molecular Mechanisms of Replication Stress ResponseR35GM137800 · NIGMS · UNIVERSITY OF SOUTH FLORIDA · PI Huzefa Mannan Dungrawala · 2020 to 2026
$2.3M
NIGMS NIH HHS R35 GM137800NIGMS NIH HHS R35GM137800
6 · The paper itself

Abstract

Nucleosome remodelers at replication forks function in the assembly and maturation of chromatin post DNA synthesis. The ISWI chromatin remodeler SNF2L (or SMARCA1) travels with replication forks but its contribution to DNA replication remains largely unknown. We find that fork elongation is curtailed when SNF2L is absent. SNF2L deficiency elevates replication stress and causes fork collapse due to remodeling activities by fork reversal enzymes. Mechanistically, SNF2L regulates nucleosome assembly to suppress post-replicative ssDNA gap accumulation. Gap induction is not dependent on fork remodeling and PRIMPOL. Instead, gap synthesis is driven by MRE11 and EXO1 indicating susceptibility of nascent DNA to nucleolytic cleavage and resection when SNF2L is removed. Additionally, nucleosome remodeling by SNF2L protects nascent chromatin from MNase digestion and gap induction highlighting a critical role of SNF2L in chromatin assembly post DNA synthesis to maintain unperturbed replication.

Indexed as

Chromatin Assembly and DisassemblyDNA ReplicationExodeoxyribonucleasesNucleosomesAdenosine TriphosphatasesChromatinDNADNA-Binding ProteinsDNA HelicasesDNA, Single-StrandedSaccharomyces cerevisiae ProteinsTranscription FactorsAdenosine TriphosphatasesChromatinDNADNA-Binding ProteinsDNA HelicasesDNA, Single-Strandedexodeoxyribonuclease IExodeoxyribonucleasesNucleosomesSaccharomyces cerevisiae ProteinsTranscription Factors

Identifiers

PMID39413208
PMCPMC11602140

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.