Evidence map›Paper›PMID 39409885›Full record

ArticleCancers2024

Germline Polymorphisms Associated with Overall Survival in Lung Adenocarcinoma: Genome-Wide Analysis.

Francesca Minnai, Sara Noci, Martina Esposito, Marc A Schneider, Sonja Kobinger, Martin Eichhorn, Hauke Winter, Hans Hoffmann, Mark Kriegsmann, Matteo A Incarbone and 5 more

Abstract read
In one paragraph

Article in Cancers, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Regulatory polymorphisms ofJournal for immunotherapy of cancer · 2025
    Article
  2. Journal of Korean medical science · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Francesca MinnaiInstitute for Biomedical Technologies, National Research Council, Segrate, 20054 Milan, Italy.
Sara NociDepartment of Experimental Oncology, Fondazione IRCCS Istituto Nazionale dei Tumori, 20133 Milan, Italy.ORCID 0000-0002-6227-3907
Martina EspositoInstitute for Biomedical Technologies, National Research Council, Segrate, 20054 Milan, Italy.ORCID 0009-0007-4118-3893
Marc A SchneiderTranslational Research Unit (STF), Thoraxklinik, University Hospital Heidelberg, 69120 Heidelberg, Germany.ORCID 0000-0001-8269-3821
Sonja KobingerDepartment of Thoracic Surgery, Thoraxklinik, University Hospital Heidelberg, 69120 Heidelberg, Germany.
Martin EichhornDepartment of Thoracic Surgery, Thoraxklinik, University Hospital Heidelberg, 69120 Heidelberg, Germany.
Hauke WinterTranslational Lung Research Center (TLRC), German Center for Lung Research (DZL), 69120 Heidelberg, Germany.
Hans HoffmannDepartment of Thoracic Surgery, Klinikum Rechts der Isar, Technische Universität München, 80333 Munich, Germany.
Mark KriegsmannTranslational Lung Research Center (TLRC), German Center for Lung Research (DZL), 69120 Heidelberg, Germany.
Matteo A IncarboneDepartment of Surgery, Ospedale San Giuseppe, IRCCS Multimedica, 20099 Milan, Italy.
Giovanni MattioniThoracic Surgery and Lung Transplantation Unit, Foundation IRCCS Ca' Granda Ospedale Maggiore Policlinico, 20122 Milan, Italy.ORCID 0000-0003-4136-8293
Davide TosiThoracic Surgery and Lung Transplantation Unit, Foundation IRCCS Ca' Granda Ospedale Maggiore Policlinico, 20122 Milan, Italy.ORCID 0000-0003-3767-0449
Thomas MuleyTranslational Research Unit (STF), Thoraxklinik, University Hospital Heidelberg, 69120 Heidelberg, Germany.ORCID 0000-0002-8141-0604
Tommaso A DraganiDepartment of Experimental Oncology, Fondazione IRCCS Istituto Nazionale dei Tumori, 20133 Milan, Italy.ORCID 0000-0001-5915-4598
Francesca ColomboInstitute for Biomedical Technologies, National Research Council, Segrate, 20054 Milan, Italy.ORCID 0000-0003-2015-4317

Funding

Italian Association for Cancer Research IG 20226
6 · The paper itself

Abstract

BACKGROUND/

objectivesLung cancer remains a global health concern, with substantial variation in patient survival. Despite advances in detection and treatment, the genetic basis for the divergent outcomes is not understood. We investigated germline polymorphisms that modulate overall survival in 1464 surgically resected lung adenocarcinoma patients.

methodsA multivariable Cox proportional hazard model was used to assess the association of more than seven million polymorphisms with overall survival at the 60-month follow-up, considering age, sex, pathological stage, decade of surgery and principal components as covariates. Genes in which variants were identified were studied in silico to investigate functional roles.

resultsSix germline variants passed the genome-wide significance threshold. These single nucleotide polymorphisms were mapped to non-coding (intronic) regions on chromosomes 2, 3, and 5. The minor alleles of rs13000315, rs151212827, and rs190923216 (chr. 2, 3 and 5, respectively) were found to be independent negative prognostic factors. All six variants have been reported to regulate the expression of nine genes, seven of which are protein-coding, in different tissues. Survival-associated variants on chromosomes 2 and 3 were already reported to regulate the expression of

conclusionsThis study highlights a potential regulatory role of the identified polymorphisms in influencing outcome and suggests a mechanistic link between these variants, gene expression regulation, and lung adenocarcinoma prognosis. Validation and functional studies are warranted to elucidate the mechanisms underlying these associations.

Indexed as

CoxeQTLGWASNAGKNT5DC2SNPs

Identifiers

PMID39409885
PMCPMC11475969

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.