Evidence map›Paper›PMID 39408726›Full record

ArticleInternational journal of molecular sciences2024

Metabolome and Transcriptome Joint Analysis Reveals That Different Sucrose Levels Regulate the Production of Flavonoids and Stilbenes in Grape Callus Culture.

Xiaojiao Gu, Zhiyi Fan, Yuan Wang, Jiajun He, Chuanlin Zheng, Huiqin Ma

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xiaojiao GuCollege of Horticulture, China Agricultural University, Beijing 100083, China.
Zhiyi FanCollege of Horticulture, China Agricultural University, Beijing 100083, China.ORCID 0009-0000-6720-1788
Yuan WangCollege of Horticulture, China Agricultural University, Beijing 100083, China.
Jiajun HeCollege of Horticulture, China Agricultural University, Beijing 100083, China.
Chuanlin ZhengCollege of Horticulture, China Agricultural University, Beijing 100083, China.
Huiqin MaCollege of Horticulture, China Agricultural University, Beijing 100083, China.

Funding

he key research project for fig development of Weiyuan County, China. No. 1002-69199007
6 · The paper itself

Abstract

To reveal the effect of sucrose concentration on the production of secondary metabolites, a metabolome and transcriptome joint analysis was carried out using callus induced from grape variety Mio Red cambial meristematic cells. We identified 559 metabolites-mainly flavonoids, phenolic acids, and stilbenoids-as differential content metabolites (fold change ≥2 or ≤0.5) in at least one pairwise comparison of treatments with 7.5, 15, or 30 g/L sucrose in the growing media for 15 or 30 days (d). Resveratrol, viniferin, and amurensin contents were highest at 15 d of subculture; piceid, ampelopsin, and pterostilbene had higher contents at 30 d. A transcriptome analysis identified 1310 and 498 (at 15 d) and 1696 and 2211 (at 30 d) differentially expressed genes (DEGs; log2(fold change) ≥ 1,

Indexed as

FlavonoidsGene Expression Regulation, PlantMetabolomeStilbenesSucroseTranscriptomeVitisGene Expression ProfilingPlant ProteinsFlavonoidsPlant ProteinsStilbenesSucroseflavonoidsgrape callusmetabolomestilbenessucrose concentrationtranscriptome

Identifiers

PMID39408726
PMCPMC11476901

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.