Evidence map›Paper›PMID 39406897›Full record

ArticleCommunications biology2024

Candidatus Desulforudis audaxviator dominates a 975 m deep groundwater community in central Sweden.

George Westmeijer, Femke van Dam, Riikka Kietäväinen, Carolina González-Rosales, Stefan Bertilsson, Henrik Drake, Mark Dopson

Abstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

George WestmeijerCentre for Ecology and Evolution in Microbial model Systems (EEMiS), Linnaeus University, Stuvaregatan 4, Kalmar, Sweden. george.westmeijer@umu.se.ORCID 0000-0002-5529-2237
Femke van DamDepartment of Biology and Environmental Sciences, Linnaeus University, Stuvaregatan 4, Kalmar, Sweden.ORCID 0000-0002-5526-5044
Riikka KietäväinenGeological Survey of Finland, Espoo, Finland.ORCID 0000-0002-4867-777X
Carolina González-RosalesCentre for Ecology and Evolution in Microbial model Systems (EEMiS), Linnaeus University, Stuvaregatan 4, Kalmar, Sweden.
Stefan BertilssonDepartment of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Uppsala, Sweden.ORCID 0000-0002-4265-1835
Henrik DrakeDepartment of Biology and Environmental Sciences, Linnaeus University, Stuvaregatan 4, Kalmar, Sweden.ORCID 0000-0001-7230-6509
Mark DopsonCentre for Ecology and Evolution in Microbial model Systems (EEMiS), Linnaeus University, Stuvaregatan 4, Kalmar, Sweden.ORCID 0000-0002-9622-3318

Funding

Vetenskapsrådet (Swedish Research Council) 2018-04311
6 · The paper itself

Abstract

The continental bedrock contains groundwater-bearing fractures that are home to microbial populations that are vital in mediating the Earth's biogeochemical cycles. However, their diversity is poorly understood due to the difficulty of obtaining samples from this environment. Here, a groundwater-bearing fracture at 975 m depth was isolated by employing packers in order to characterize the microbial community via metagenomes combined with prokaryotic and eukaryotic marker genes (16S and 18S ribosomal RNA gene). Genome-resolved analyses revealed a community dominated by sulfate-reducing Bacillota, predominantly represented by Candidatus Desulforudis audaxviator and with Wood-Ljungdahl as the most prevalent pathway for inorganic carbon fixation. Moreover, the eukaryotic community had a considerable diversity and was comprised of mainly flatworms, chlorophytes, crustaceans, ochrophytes, and fungi. These findings support the important role of the Bacillota, with the sulfate reducer Candidatus Desulforudis audaxviator as its main representative, as primary producers in the often energy-limited groundwaters of the continental subsurface.

Indexed as

GroundwaterDeltaproteobacteriaMetagenomeMicrobiotaPhylogenyRNA, Ribosomal, 16SSwedenRNA, Ribosomal, 16S

Identifiers

PMID39406897
PMCPMC11480212

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.