Evidence map›Paper›PMID 39406592›Full record

ReviewTrends in pharmacological sciences2024

Chemical proteomic mapping of reversible small molecule binding sites in native systems.

Jacob M Wozniak, Weichao Li, Christopher G Parker

Abstract readReview
In one paragraph

Review in Trends in pharmacological sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jacob M WozniakBelharra Therapeutics, San Diego, CA, USA. Electronic address: jwozniak@belharratx.com.
Weichao LiDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA.
Christopher G ParkerDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA, USA. Electronic address: cparker@scripps.edu.

Funding

Chemoproteomic-Enabled Strategy to Study SLC Transporter Roles in InflammationR01AI156268 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI PARKER, CHRISTOPHER G · 2021 to 2025
$3.3M
NIAID NIH HHS R01 AI156268
6 · The paper itself

Abstract

The impact of small molecules in human biology are manifold; not only are they critical regulators of physiological processes, but they also serve as probes to investigate biological pathways and leads for therapeutic development. Identifying the protein targets of small molecules, and where they bind, is critical to understanding their functional consequences and potential for pharmacological use. Over the past two decades, chemical proteomics has emerged as a go-to strategy for the comprehensive mapping of small molecule-protein interactions. Recent advancements in this field, particularly innovations of photoaffinity labeling (PAL)-based methods, have enabled the robust identification of small molecule binding sites on protein targets, often in live cells. In this opinion article, we examine these advancements as well as reflect on how their strategic integration with other emerging tools can advance therapeutic development.

Indexed as

Photoaffinity LabelsProteomicsSmall Molecule LibrariesAnimalsBinding SitesHumansProtein BindingProteinsPhotoaffinity LabelsProteinsSmall Molecule Librariesbinding site mappingchemical proteomicsdrug discovery

Identifiers

PMID39406592
PMCPMC12101088

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.