Evidence map›Paper›PMID 39405432›Full record

ArticleThe Plant cell2024

TYPHON proteins are RAB-dependent mediators of the trans-Golgi network secretory pathway.

Anirban Baral, Delphine Gendre, Bibek Aryal, Louise Fougère, Luciano Martin Di Fino, Chihiro Ohori, Bernadette Sztojka, Tomohiro Uemura, Takashi Ueda, Peter Marhavý and 2 more

Abstract read
In one paragraph

Article in The Plant cell, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Anirban BaralDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Umeå 901 87, Sweden.ORCID 0000-0001-6676-284X
Delphine GendreDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Umeå 901 87, Sweden.ORCID 0000-0001-9230-0585
Bibek AryalDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Umeå 901 87, Sweden.ORCID 0000-0003-0840-6956
Louise FougèreLaboratoire de Biogénèse Membranaire, UMR5200, Université de Bordeaux, CNRS, Villenave d'Ornon 33140, France.ORCID 0009-0009-1004-4502
Luciano Martin Di FinoDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Umeå 901 87, Sweden.ORCID 0000-0002-7116-5123
Chihiro OhoriNatural Science Division, Faculty of Core Research, Ochanomizu University, Tokyo 112-8610, Japan.ORCID 0009-0005-7820-0461
Bernadette SztojkaDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Umeå 901 87, Sweden.ORCID 0009-0004-9409-1114
Tomohiro UemuraNatural Science Division, Faculty of Core Research, Ochanomizu University, Tokyo 112-8610, Japan.ORCID 0000-0001-7270-7986
Takashi UedaDivision of Cellular Dynamics, National Institute for Basic Biology, Okazaki, Aichi 444-8585, Japan.ORCID 0000-0002-5190-892X
Peter MarhavýDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Umeå 901 87, Sweden.ORCID 0000-0002-0178-2230
Yohann BouttéLaboratoire de Biogénèse Membranaire, UMR5200, Université de Bordeaux, CNRS, Villenave d'Ornon 33140, France.ORCID 0000-0002-7555-074X
Rishikesh P BhaleraoDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, Umeå 901 87, Sweden.ORCID 0000-0003-4384-7036

Funding

Knut and Allice Wallenberg Foundation 20120050
6 · The paper itself

Abstract

The trans-Golgi network (TGN), a key compartment in endomembrane trafficking, participates in both secretion to and endocytosis from the plasma membrane. Consequently, the TGN plays a key role in plant growth and development. Understanding how proteins are sorted for secretion or endocytic recycling at the TGN is critical for elucidating mechanisms of plant development. We previously showed that the protein ECHIDNA is essential for phytohormonal control of hypocotyl bending because it mediates secretion of cell wall components and the auxin influx carrier AUXIN RESISTANT 1 (AUX1) from the TGN. Despite the critical role of ECHIDNA in TGN-mediated trafficking, its mode of action remains unknown in Arabidopsis (Arabidopsis thaliana). We therefore performed a suppressor screen on the ech mutant. Here, we report the identification of TGN-localized TYPHON 1 (TPN1) and TPN2 proteins. A single amino acid change in either TPN protein causes dominant suppression of the ech mutant's defects in growth and AUX1 secretion, while also restoring wild-type (WT)-like ethylene-responsive hypocotyl bending. Importantly, genetic and cell biological evidence shows that TPN1 acts through RAS-ASSOCIATED BINDING H1b (RABH1b), a TGN-localized RAB-GTPase. These results provide insights into ECHIDNA-mediated secretory trafficking of cell wall and auxin carriers at the TGN, as well as its role in controlling plant growth.

Indexed as

ArabidopsisArabidopsis Proteinsrab GTP-Binding Proteinstrans-Golgi NetworkHypocotylIndoleacetic AcidsMutationProtein TransportSecretory PathwayArabidopsis ProteinsIndoleacetic Acidsrab GTP-Binding Proteins

Identifiers

PMID39405432
PMCPMC11663552

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.