Evidence map›Paper›PMID 39404690›Full record

ArticleDeep generative models : Second MICCAI Workshop, DGM4MICCAI 2022, held in conjunction with MICCAI 2022, Singapore, September 22, 2022, proceedings. MICCAI Workshop on Deep Generative Models (2nd : 2022 : Singapore)2022

Cross Attention Transformers for Multi-modal Unsupervised Whole-Body PET Anomaly Detection.

Ashay Patel, Petru-Daniel Tudosiu, Walter Hugo Lopez Pinaya, Gary Cook, Vicky Goh, Sebastien Ourselin, M Jorge Cardoso

Abstract read
In one paragraph

Article in Deep generative models : Second MICCAI Workshop, DGM4MICCAI 2022, held in conjunction with MICCAI 2022, Singapore, September 22, 2022, proceedings. MICCAI Workshop on Deep Generative Models (2nd : 2022 : Singapore), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Self-Supervised Anomaly Detection from Anomalous Training Data via Iterative Latent Token Masking.... IEEE International Conference on Computer Vision workshops. IEEE International Conference on Computer Vision · 2023
    Article
  4. TURBO: The Swiss Knife of Auto-Encoders.Entropy (Basel, Switzerland) · 2023
    Article
  5. Article
  6. Geometry-invariant abnormality detection.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention · 2023
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ashay PatelKing's College London, London, WC2R 2LS, United Kingdom.ORCID https://orcid.org/0000-0003-4212-2578
Petru-Daniel TudosiuKing's College London, London, WC2R 2LS, United Kingdom.ORCID https://orcid.org/0000-0001-6435-5079
Walter Hugo Lopez PinayaKing's College London, London, WC2R 2LS, United Kingdom.ORCID https://orcid.org/0000-0003-3739-1087
Gary CookKing's College London, London, WC2R 2LS, United Kingdom.ORCID https://orcid.org/0000-0002-8732-8134
Vicky GohKing's College London, London, WC2R 2LS, United Kingdom.ORCID https://orcid.org/0000-0002-2321-8091
Sebastien OurselinKing's College London, London, WC2R 2LS, United Kingdom.ORCID https://orcid.org/0000-0002-5694-5340
M Jorge CardosoKing's College London, London, WC2R 2LS, United Kingdom.ORCID https://orcid.org/0000-0003-1284-2558

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cancers can have highly heterogeneous uptake patterns best visualised in positron emission tomography. These patterns are essential to detect, diagnose, stage and predict the evolution of cancer. Due to this heterogeneity, a general-purpose cancer detection model can be built using unsupervised learning anomaly detection models; these models learn a healthy representation of tissue and detect cancer by predicting deviations from healthy appearances. This task alone requires models capable of accurately learning long-range interactions between organs, imaging patterns, and other abstract features with high levels of expressivity. Such characteristics are suitably satisfied by transformers, and have been shown to generate state-of-the-art results in unsupervised anomaly detection by training on healthy data. This work expands upon such approaches by introducing multi-modal conditioning of the transformer via cross-attention, i.e. supplying anatomical reference information from paired CT images to aid the PET anomaly detection task. Using 83 whole-body PET/CT samples containing various cancer types, we show that our anomaly detection method is robust and capable of achieving accurate cancer localisation results even in cases where healthy training data is unavailable. Furthermore, the proposed model uncertainty, in conjunction with a kernel density estimation approach, is shown to provide a statistically robust alternative to residual-based anomaly maps. Overall, a superior performance is demonstrated against leading alternatives, drawing attention to the potential of these approaches.

Indexed as

Cross-AttentionKernel Density EstimationMulti-modalTransformersUnsupervised Anomaly DetectionVector Quantized Variational AutoencoderWhole-Body

Identifiers

PMID39404690
PMCPMC7616582

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.