Evidence map›Paper›PMID 39404403›Full record

ArticleCells2024

An Optimized Liquid Chromatography-Mass Spectrometry Method for Ganglioside Analysis in Cell Lines.

Akeem Sanni, Andrew I Bennett, Yifan Huang, Isabella Gidi, Moyinoluwa Adeniyi, Judith Nwaiwu, Min H Kang, Michelle E Keyel, ChongFeng Gao, C Patrick Reynolds and 2 more

Abstract read
In one paragraph

Article in Cells, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Direct Comparison of MRM-MS and PRM-MS Methods for Quantitative Ganglioside Analysis.Journal of the American Society for Mass Spectrometry · 2026
    Article
  2. Review
  3. LC-MS-Based Analytical Strategies for Ganglioside Profiling.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Akeem SanniChemistry and Biochemistry Department, Texas Tech University, Lubbock, TX 79409, USA.ORCID 0000-0002-1250-7293
Andrew I BennettChemistry and Biochemistry Department, Texas Tech University, Lubbock, TX 79409, USA.ORCID 0009-0005-5877-2163
Yifan HuangChemistry and Biochemistry Department, Texas Tech University, Lubbock, TX 79409, USA.
Isabella GidiChemistry and Biochemistry Department, Texas Tech University, Lubbock, TX 79409, USA.
Moyinoluwa AdeniyiChemistry and Biochemistry Department, Texas Tech University, Lubbock, TX 79409, USA.ORCID 0009-0008-5088-4277
Judith NwaiwuChemistry and Biochemistry Department, Texas Tech University, Lubbock, TX 79409, USA.ORCID 0000-0002-7885-1345
Min H KangCancer Center, School of Medicine, Texas Tech University Health Sciences Center (TTUHSC), Lubbock, TX 79416, USA.
Michelle E KeyelCancer Center, School of Medicine, Texas Tech University Health Sciences Center (TTUHSC), Lubbock, TX 79416, USA.
ChongFeng GaoVan Andel Institute, Grand Rapids, MI 49503, USA.
C Patrick ReynoldsCancer Center, School of Medicine, Texas Tech University Health Sciences Center (TTUHSC), Lubbock, TX 79416, USA.
Brian HaabVan Andel Institute, Grand Rapids, MI 49503, USA.
Yehia MechrefChemistry and Biochemistry Department, Texas Tech University, Lubbock, TX 79409, USA.ORCID 0000-0002-6661-6073

Funding

Sensitive and Quantitative MS-bases Glycomic Mapping PlatformR01GM112490 · NIGMS · TEXAS TECH UNIVERSITY · PI MECHREF, YEHIA · 2014 to 2024
$3.2M
Subpopulations of Pancreatic Cancer Cells Defined by Glycan MarkersU01CA226158 · NCI · VAN ANDEL RESEARCH INSTITUTE · PI BRAND, RANDALL, HAAB, BRIAN B. · 2019 to 2023
$3.2M
CPRIT RP200432 and RP210154NCI NIH HHS U01 CA226158NCI NIH HHS U01CA226158NIGMS NIH HHS 1R01GM112490-08NIGMS NIH HHS R01 GM112490The CH Foundation NoneWElch Foundation D-0005
6 · The paper itself

Abstract

Gangliosides are glycosphingolipids composed of a sialylated glycan head group and a ceramide backbone. These anionic lipids form lipid rafts and play crucial roles in regulating various proteins involved in signal transduction, adhesion, and cell-cell recognition. Neuroblastoma, a pediatric cancer of the sympathetic nervous system, is treated with intensive chemotherapy, radiation, and an antibody targeting the GD2 ganglioside. Gangliosides are critical in neuroblastoma development and serve as therapeutic targets, making it essential to establish a reliable, rapid, and cost-effective method for profiling gangliosides, particularly one capable of isomeric separation of intact species. In this study, liquid chromatography-mass spectrometry (LC-MS) was optimized using standard gangliosides, followed by the optimization of sphingolipid extraction methods from cell lines by comparing Folch and absolute methanol extraction techniques. Percent recovery and the number of identified sphingolipids were used to evaluate the analytical merits of these methods. A standard gangliosides calibration curve demonstrated excellent linearity (R

Indexed as

GangliosidesCell Line, TumorChromatography, LiquidHumansLiquid Chromatography-Mass SpectrometryMass SpectrometryNeuroblastomaGangliosidesgangliosidesLC-MSneuroblastomaZIC-HILIC

Identifiers

PMID39404403
PMCPMC11476222

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.