Evidence map›Paper›PMID 39402985›Full record

ArticleThe journal of physical chemistry. A2024

Dissociation Energies via Embedding Techniques.

Florian Feyersinger, Peter E Hartmann, Johannes Hoja, Peter Reinholdt, Florian Libisch, Jacob Kongsted, Peter Puschnig, A Daniel Boese

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Article in The journal of physical chemistry. A, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Florian FeyersingerDepartment of Chemistry, University of Graz, Heinrichstraße 28/IV, 8010 Graz, Austria.
Peter E HartmannDepartment of Chemistry, University of Graz, Heinrichstraße 28/IV, 8010 Graz, Austria.
Johannes HojaDepartment of Chemistry, University of Graz, Heinrichstraße 28/IV, 8010 Graz, Austria.ORCID 0000-0003-4138-2124
Peter ReinholdtDepartment of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5230 Odense M, Denmark.
Florian LibischInstitute for Theoretical Physics, TU Wien, 1040 Vienna, Austria.ORCID 0000-0001-5641-9458
Jacob KongstedDepartment of Physics, Chemistry and Pharmacy, University of Southern Denmark, Campusvej 55, 5230 Odense M, Denmark.ORCID 0000-0002-7725-2164
Peter PuschnigDepartment of Physics, University of Graz, 8010 Graz, Austria.ORCID 0000-0002-8057-7795
A Daniel BoeseDepartment of Chemistry, University of Graz, Heinrichstraße 28/IV, 8010 Graz, Austria.ORCID 0000-0001-7388-778X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Due to the large number of interactions, evaluating interaction energies for large or periodic systems results in time-consuming calculations. Prime examples are liquids, adsorbates, and molecular crystals. Thus, there is a high demand for a cheap but still accurate method to determine interaction energies and gradients. One approach to counteract the computational cost is to fragment a large cluster into smaller subsystems, sometimes called many-body expansion, with the fragments being molecules or parts thereof. These subsystems can then be embedded into larger entities, representing the bigger system. In this work, we test several subsystem approaches and explore their limits and behaviors, determined by calculations of trimer interaction energies. The methods presented here encompass mechanical embedding, point charges, polarizable embedding, polarizable density embedding, and density embedding. We evaluate nonembedded fragmentation, QM/MM (quantum mechanics/molecular mechanics), and QM/QM (quantum mechanics/quantum mechanics) embedding theories. Finally, we make use of symmetry-adapted perturbation theory utilizing density functional theory for the monomers to interpret the results. Depending on the strength of the interaction, different embedding methods and schemes prove favorable to accurately describe a system. The embedding approaches presented here are able to decrease the interaction energy errors with respect to full system calculations by a factor of up to 20 in comparison to simple/unembedded approaches, leading to errors below 0.1 kJ/mol.

Identifiers

PMID39402985
PMCPMC11514013

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.