Evidence map›Paper›PMID 39402525›Full record

ArticleBMC endocrine disorders2024

Targeted long-read sequencing identifies missing pathogenic variant in unsolved 11β-hydroxylase deficiency.

Jidong Liu, Huihui Tian, Xinchen Jin, Yanxiang Wang, Zhenhong Zhang, Mengxue Li, Lulu Dai, Xiaoli Zhang, Ling Jiang

Abstract readCase Reports
In one paragraph

Article in BMC endocrine disorders, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Jidong LiuDepartment of Endocrinology and Metabolism, Cheeloo College of Medicine, Qilu Hospital, Shandong University, Jinan, 250012, P.R. China.
Huihui TianJinan AXZE Medical Test Laboratory, Jinan, Shandong Province, 250101, China.
Xinchen JinJinan AXZE Medical Test Laboratory, Jinan, Shandong Province, 250101, China.
Yanxiang WangJinan AXZE Medical Test Laboratory, Jinan, Shandong Province, 250101, China.
Zhenhong ZhangJinan AXZE Medical Test Laboratory, Jinan, Shandong Province, 250101, China.
Mengxue LiJinan AXZE Medical Test Laboratory, Jinan, Shandong Province, 250101, China.
Lulu DaiJinan AXZE Medical Test Laboratory, Jinan, Shandong Province, 250101, China.
Xiaoli ZhangDepartment of Endocrinology and Metabolism, Cheeloo College of Medicine, Qilu Hospital, Shandong University, Jinan, 250012, P.R. China. sallyzh66@sina.com.
Ling JiangDepartment of Endocrinology and Metabolism, Cheeloo College of Medicine, Qilu Hospital, Shandong University, Jinan, 250012, P.R. China. jiangling75@email.sdu.edu.cn.

Funding

National Natural Science Foundation of China 82100873
6 · The paper itself

Abstract

background11β-hydroxylase deficiency (11β-OHD), caused by homozygosity or compound heterozygosity CYP11B1 variants, is the second most common cause of congenital adrenal hyperplasia (CAH). Due to the high degree of sequence identity between CYP11B1 and CYP11B2, chimeric genes, and complex structural variants (SVs), the conventional approach to gene testing for 11β-OHD is facing challenges. The study aimed to clarify the underlying genetic causes of two siblings of a Chinese family with 11β-OHD.

methodsPeripheral blood samples and clinical information were collected from subjects and their family members. Sex steroid concentrations were measured using LC-MS/MS. Long-range PCR-based next-generation sequencing (NGS), PCR assay and target long-read sequencing were used to detect the pathogenic variants.

resultsEarly onset hypertension, increased serum levels of adrenocorticotropin (ACTH), progesterone, testosterone, and decreased cortisol and potassium were detected in both affected siblings. Long-range PCR-based NGS identified a heterozygous missense variant (NM_000497.4:c.281 C > T, p.P94> L) in CYP11B1 gene in the two siblings. PCR detected no chimeric CYP11B2/CYP11B1 gene. We finally identified a second pathogenic variant in CYP11B1 gene via target long-read sequencing (T-LRS). This novel variant was a deletion-insertion variant and located chr8:143957269-143,957,579 (hg19) with the insertion of 'ACAG' (NM_000497.4:c.954 + 78_980delinsACAG), which was in trans with CYP11B1: c.281 C > T.

conclusionsOur study suggests that the integrated long-range PCR-based NGS and T-LRS seem to be the most reliable and accurate method for 11β-OHD genetic diagnosis and carrier sequencing.

Indexed as

Adrenal Hyperplasia, CongenitalHigh-Throughput Nucleotide SequencingSteroid 11-beta-HydroxylaseHumansMutation, MissensePedigreePrognosisSteroid 11-beta-Hydroxylase11β-hydroxylaseCongenital adrenal hyperplasiaCYP11B1Long-read sequencing

Identifiers

PMID39402525
PMCPMC11472585

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.