Evidence map›Paper›PMID 39402324›Full record

ArticleBritish journal of cancer2024

Identification of a 5-gene signature panel for the prediction of prostate cancer progression.

Michelle Shen, Fernando García-Marqués, Arvind Muruganantham, Shiqin Liu, James Robert White, Abel Bermudez, Meghan A Rice, Kelsey Thompson, Chun-Liang Chen, Chia-Nung Hung and 6 more

Abstract read
In one paragraph

Article in British journal of cancer, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Michelle ShenDepartment of Molecular and Medical Pharmacology, University of California Los Angeles, Los Angeles, CA, USA.
Fernando García-MarquésDepartment of Radiology, Stanford University, Stanford, CA, USA.
Arvind MurugananthamDepartment of Radiology, Stanford University, Stanford, CA, USA.
Shiqin LiuDepartment of Molecular and Medical Pharmacology, University of California Los Angeles, Los Angeles, CA, USA.
James Robert WhiteResphera Biosciences LLC, Baltimore, MD, USA.
Abel BermudezDepartment of Radiology, Stanford University, Stanford, CA, USA.
Meghan A RiceDepartment of Radiology, Stanford University, Stanford, CA, USA.
Kelsey ThompsonDepartment of Radiology, Stanford University, Stanford, CA, USA.
Chun-Liang ChenDepartment of Molecular Medicine, UT Health San Antonio, San Antonio, TX, USA.
Chia-Nung HungDepartment of Molecular Medicine, UT Health San Antonio, San Antonio, TX, USA.
Zhao ZhangDepartment of Molecular Medicine, UT Health San Antonio, San Antonio, TX, USA.
Tim H HuangDepartment of Molecular Medicine, UT Health San Antonio, San Antonio, TX, USA.ORCID http://orcid.org/0000-0001-5985-9176
Michael A LissDepartment of Urology, UT Health San Antonio, San Antonio, TX, USA.
Kenneth J PientaBrady Urological Institute, Johns Hopkins School of Medicine, Baltimore, MD, USA.ORCID http://orcid.org/0000-0002-4138-2186
Sharon J PitteriDepartment of Radiology, Stanford University, Stanford, CA, USA.ORCID http://orcid.org/0000-0002-3119-873X
Tanya StoyanovaDepartment of Molecular and Medical Pharmacology, University of California Los Angeles, Los Angeles, CA, USA. tstoyanova@mednet.ucla.edu.ORCID http://orcid.org/0000-0003-0119-9747

Funding

UCLA SPORE IN PROSTATE CANCERP50CA092131 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI REITER, ROBERT E · 2002 to 2023
$42.6M
VACCINIA PSA FOR ANDROGEN-MODULATED POST-SURGICAL RECURRENCE OF PROSTATE CANCERP50CA069568 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHINNAIYAN, ARUL M · 1995 to 2013
$31.3M
Tumor microvesicle-mediated modulation of the bone microenvironmentP01CA093900 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KELLER, EVAN T · 2004 to 2024
$29.6M
Stanford Molecular and Cellular Characterization LaboratoryU01CA196387 · NCI · STANFORD UNIVERSITY · PI BROOKS, JAMES D. · 2015 to 2020
$5.2M
Glycosylation and Immune Evasion in Urologic TumorsU01CA226051 · NCI · STANFORD UNIVERSITY · PI BERTOZZI, CAROLYN, BROOKS, JAMES D. · 2019 to 2023
$3.0M
Testing ATAD2 as a new therapeutic target for advanced prostate cancerR01CA287669 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Tanya I Stoyanova · 2024 to 2026
$2.8M
Elucidating the Role of Trop2 in Prostate CancerR37CA240822 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Tanya I Stoyanova · 2020 to 2026
$2.5M
Delineate the Role of GSTP1 in Advanced Prostate CancerR01CA274978 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Tanya I Stoyanova · 2023 to 2026
$1.8M
Elucidating the Role of UCHL1 in Aggressive Prostate CancerR01CA244281 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI STOYANOVA, TANYA I · 2020 to 2024
$1.8M
NCI NIH HHS P01 CA093900NCI NIH HHS P50 CA069568NCI NIH HHS P50 CA092131NCI NIH HHS R01 CA244281NCI NIH HHS R01 CA274978NCI NIH HHS R01 CA287669NCI NIH HHS R37 CA240822NCI NIH HHS U01 CA196387NCI NIH HHS U01 CA226051U.S. Department of Health & Human Services | National Institutes of Health (NIH) CA196387U.S. Department of Health & Human Services | National Institutes of Health (NIH) CA226051U.S. Department of Health & Human Services | National Institutes of Health (NIH) P50CA69568U.S. Department of Health & Human Services | National Institutes of Health (NIH) PO1CA093900U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) P50CA092131U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA244281U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA274978U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R01CA287669U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) R37CA240822
6 · The paper itself

Abstract

backgroundDespite nearly 100% 5-year survival for localised prostate cancer, the survival rate for metastatic prostate cancer significantly declines to 32%. Thus, it is crucial to identify molecular indicators that reflect the progression from localised disease to metastatic prostate cancer.

methodsTo search for molecular indicators associated with prostate cancer metastasis, we performed proteomic analysis of rapid autopsy tissue samples from metastatic prostate cancer (N = 8) and localised prostate cancer (N = 2). Then, we utilised multiple independent, publicly available prostate cancer patient datasets to select candidates that also correlate with worse prostate cancer clinical prognosis.

resultsWe identified 154 proteins with increased expressions in metastases relative to localised prostate cancer through proteomic analysis. From the subset of these candidates that correlate with prostate cancer recurrence (N = 28) and shorter disease-free survival (N = 37), we identified a 5-gene signature panel with improved performance in predicting worse clinical prognosis relative to individual candidates.

conclusionsOur study presents a new 5-gene signature panel that is associated with worse clinical prognosis and is elevated in prostate cancer metastasis on both protein and mRNA levels. Our 5-gene signature panel represents a potential modality for the prediction of prostate cancer progression towards the onset of metastasis.

Indexed as

Disease ProgressionProstatic NeoplasmsAgedBiomarkers, TumorDisease-Free SurvivalGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleMiddle AgedNeoplasm MetastasisNeoplasm Recurrence, LocalPrognosisProteomicsTranscriptomeBiomarkers, Tumor

Identifiers

PMID39402324
PMCPMC11589118

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.