Evidence map›Paper›PMID 39402115›Full record

ArticleScientific reports2024

Altered expression pattern of immune response-related genes and isoforms in hypersensitivity pneumonitis lung fibroblasts.

Ana Lilia Torres-Machorro, Carina Becerril, Everardo Hernández-Plata, Erika Rubí Luis-García, Mariel Maldonado, Iliana Herrera, Miguel Negreros, Fernando Hernández-Sánchez, Criselda Mendoza-Milla, Miguel Gaxiola and 5 more

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Ana Lilia Torres-MachorroLaboratorio de Biología Celular, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
Carina BecerrilLaboratorio de Biología Celular, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
Everardo Hernández-PlataInvestigador Por México, Consejo Nacional de Humanidades, Ciencias y Tecnologías (CONAHCyT), and Instituto Nacional de Medicina Genómica, 14610, Ciudad de México, México.
Erika Rubí Luis-GarcíaLaboratorio de Biología Celular, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
Mariel MaldonadoLaboratorio de Biopatología Pulmonar INER-Ciencias-UNAM, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
Iliana HerreraLaboratorio de Biopatología Pulmonar INER-Ciencias-UNAM, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
Miguel NegrerosClínica de Vasculitis, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
Fernando Hernández-SánchezDepartamento de Investigación en Virología y Micología, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
Criselda Mendoza-MillaLaboratorio de Transducción de Señales, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
Miguel GaxiolaLaboratorio de Morfología, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
Remedios RamírezFacultad de Ciencias, Universidad Nacional Autónoma de México, 04510, Ciudad de México, México.
Annie PardoFacultad de Ciencias, Universidad Nacional Autónoma de México, 04510, Ciudad de México, México.
Ivette Buendía-RoldánLaboratorio de Investigación Traslacional en Envejecimiento y Enfermedades Fibrosantes, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
Moisés SelmanLaboratorio de Biopatología Pulmonar INER-Ciencias-UNAM, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México.
José CisnerosDepartamento de Investigación en Fibrosis Pulmonar, Instituto Nacional de Enfermedades Respiratorias Ismael Cosío Villegas, 14080, Ciudad de México, México. jcisneros828@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hypersensitivity pneumonitis (HP) is an immune-mediated inflammatory interstitial lung disease that may evolve to pulmonary fibrosis, a progressive disorder with a poor prognosis characterized by fibroblast activation and extracellular matrix accumulation. In HP lung fibroblasts, the gene expression of proteins involved in the interaction with the immune response, their isoforms, and how they influence their phenotype have yet to be elucidated. We analyzed the expression and splicing variants of 16 target genes involved in the interaction between HP fibroblasts and immune signaling and evaluated possible correlations with clinical data. The comparison of HP and control fibroblasts revealed distinct gene expression patterns. HP lung fibroblasts displayed an increased expression of IFI27 and PDFGRA and a downregulation of IL17RC and TGFBR3. IFI27 immunoreactive protein was markedly increased in HP lung tissues and normal fibroblasts treated with TGF-β. Furthermore, IFI27 overexpression in normal fibroblasts increased α-SMA and decreased cell number over time. The isoform analysis showed similar expression patterns for most genes, except for the AGER receptor with increased soluble variants relative to full-length AGER in HP fibroblasts. These findings indicate important differences in the expression of genes related to the immune response by HP fibroblasts, highlighting their unique characteristics and providing further insight into a possible profibrotic role of IFI27 in the disease.

Indexed as

Alveolitis, Extrinsic AllergicFibroblastsLungProtein IsoformsAgedFemaleGene Expression RegulationHumansMaleMiddle AgedTransforming Growth Factor betaProtein IsoformsTransforming Growth Factor betaAGERFibroblastsHypersensitivity pneumonitisIFI27mRNA splicing isoformsPDGFRAα-SMA

Identifiers

PMID39402115
PMCPMC11473681

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.