Evidence map›Paper›PMID 39402100›Full record

ArticleScientific reports2024

Expression analysis of the apple HSP70 gene family in abiotic stress and phytohormones and expression validation of candidate MdHSP70 genes.

Ming Liu, Zhiyuan Bian, Miao Shao, Yongqing Feng, Weifeng Ma, Guoping Liang, Juan Mao

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Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Ming LiuCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Zhiyuan BianCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Miao ShaoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Yongqing FengCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Weifeng MaCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Guoping LiangCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China.
Juan MaoCollege of Horticulture, Gansu Agricultural University, Lanzhou, 730070, China. maojuan@gsau.edu.cn.

Funding

2023 Modern Silk Road Cold and Drought Agricultural Science and Technology Support Project KJZC-2023-13Industrial Support Plan of Higher Education of Gansu 2023CYZC-48Science and Technology Major Project of Gansu Province, China 22ZD6NA045
6 · The paper itself

Abstract

Heat shock protein 70 (HSP70) is one kind of molecular chaperones which are widely found in organisms, and its members are highly conserved among each other, with important roles in plant growth and development. In this study, 56 HSP70 genes were identified from the apple genome database. Analysis of gene duplication events showed that tandem and segmental duplication events play an important role in promoting the amplification of the MdHSP70 gene family. Collinearity analysis showed that HSP70 family members of apple were more closely related to HSP70 family members of Arabidopsis, tomato and soybean. The promoter region of the apple HSP70 genes contains a large number of cis-acting elements in response to hormones and stress. Tissue-specific expression analysis showed that some of the genes were associated with various stages of the apple growth process. Codon preference analysis showed small differences between codon bases 1 and 3 in the apple HSP70 genome, and the codon base composition had a small effect on codon usage preference. The multiple expression patterns of the MdHSP70 gene suggested that MdHSP70 gene members play important roles in growth and development and in response to hormonal and abiotic stresses. The yeast two-hybrid (Y2H) demonstrated that MdHSP70-53 interacts with MdDVH24_032563. The qRT-PCR analysis showed that most MdHSP70 members' hormonal and abiotic stresses (MdHSP70-6, MdHSP70-26 and MdHSP70-45) appeared to be highly expressed. To further elucidate the function of MdHSP70 (6, 26, 45), we introduced them into tobacco to confirm subcellular locations and noted that these genes are located in the cytoplasm and cell membrane. This study serves as a theoretical basis for further studies of the MdHSP70 gene and helps to further investigate the functional characterization of MdHSP70 gene.

Indexed as

Gene Expression Regulation, PlantHSP70 Heat-Shock ProteinsMalusMultigene FamilyPlant Growth RegulatorsPlant ProteinsStress, PhysiologicalGene DuplicationGene Expression ProfilingPhylogenyPromoter Regions, GeneticHSP70 Heat-Shock ProteinsPlant Growth RegulatorsPlant ProteinsAbiotic stressAppleBioinformaticsHSP70PhytohormonesSubcellular proteins

Identifiers

PMID39402100
PMCPMC11473515

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.