Evidence map›Paper›PMID 39401861›Full record

ArticleThe European respiratory journal2025

Evidence for a lipofibroblast-to-

Arun Lingampally, Marin Truchi, Olivier Mauduit, Vanessa Delcroix, Esmeralda Vasquez-Pacheco, Marine Gautier-Isola, Xuran Chu, Ali Khadim, Cho-Ming Chao, Mahsa Zabihi and 24 more

Abstract read
In one paragraph

Article in The European respiratory journal, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. RUNX1 is a mediator of fibrotic activation and epigenetic memory in lung fibroblasts.American journal of respiratory cell and molecular biology · 2026
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Loss of lung mesenchymal identities in culture and a screening approach to identify restorative cues.American journal of physiology. Lung cellular and molecular physiology · 2025
    Article
  13. Review
  14. Pathogenic expansion: fibroblast proliferation fuels fibrosis.The Journal of clinical investigation · 2025
    Article
  15. Article
  16. Scar wars: the viral menace.American journal of physiology. Lung cellular and molecular physiology · 2025
    Review
  17. Review
  18. Article
  19. Emerging Concepts in Fibroblast Biology and Progressive Pulmonary Fibrosis.Seminars in respiratory and critical care medicine · 2025
    Review
  20. Stromal heterogeneity in the adult lung delineated by single-cell genomics.American journal of physiology. Cell physiology · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

34 authors.

Arun LingampallyThe Quzhou Affiliated Hospital of Wenzhou Medical University, Quzhou People's Hospital, Quzhou, China.
Marin TruchiUniversité Côte d'Azur, UMR CNRS 7275 Inserm 1323, IPMC, FHU-OncoAge, IHU RespiERA, Valbonne, France.
Olivier MauduitDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA.
Vanessa DelcroixDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA.
Esmeralda Vasquez-PachecoDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Marine Gautier-IsolaUniversité Côte d'Azur, UMR CNRS 7275 Inserm 1323, IPMC, FHU-OncoAge, IHU RespiERA, Valbonne, France.
Xuran ChuOujiang Laboratory (Zhejiang Lab for Regenerative Medicine, Vision and Brain Health), School of Pharmaceutical Science, Wenzhou Medical University, Wenzhou, P.R. China.
Ali KhadimDepartment of Medicine V, Internal Medicine, Infectious Diseases and Infection Control, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Cho-Ming ChaoCardio-Pulmonary Institute (CPI), Giessen, Germany.
Mahsa ZabihiDepartment of Medicine V, Internal Medicine, Infectious Diseases and Infection Control, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Sara TaghizadehDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Stefano RivettiDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Manuela MaregaDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Alena MoiseenkoImmunology and Respiratory Department, Boehringer Ingelheim Pharma GmbH, Biberach an der Riss, Germany.
Stefan HadzicDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Ana Ivonne Vazquez-ArmendarizUniversity of Bonn, Transdisciplinary Research Area Life and Health, Organoid Biology, Life and Medical Sciences Institute, Bonn, Germany.ORCID https://orcid.org/0000-0001-8498-6492
Susanne HeroldDepartment of Medicine V, Internal Medicine, Infectious Diseases and Infection Control, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.ORCID https://orcid.org/0000-0001-6343-0911
Stefan GüntherMax Planck Institute for Heart and Lung Research, W.G. Kerckhoff Institute, Bad Nauheim, Germany.
Pamela Millar-BüchnerDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Janine KoepkeDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Christos SamakovlisDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Jochen WilhelmDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.ORCID https://orcid.org/0000-0001-5544-9647
Marek BartkuhnCardio-Pulmonary Institute (CPI), Giessen, Germany.
Thomas BraunMax Planck Institute for Heart and Lung Research, W.G. Kerckhoff Institute, Bad Nauheim, Germany.
Norbert WeissmannDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
JinSan ZhangThe Quzhou Affiliated Hospital of Wenzhou Medical University, Quzhou People's Hospital, Quzhou, China.
Malgorzata WygreckaDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.
Helen P MakarenkovaDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA, USA.
Andreas GüntherDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.ORCID https://orcid.org/0000-0002-2187-0975
Werner SeegerDepartment of Medicine II, Internal Medicine, Pulmonary and Critical Care, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.ORCID https://orcid.org/0000-0003-1946-0894
Chengshui ChenThe Quzhou Affiliated Hospital of Wenzhou Medical University, Quzhou People's Hospital, Quzhou, China.
Elie El AghaDepartment of Medicine V, Internal Medicine, Infectious Diseases and Infection Control, Universities of Giessen and Marburg Lung Center (UGMLC), German Center for Lung Research (DZL), Justus-Liebig University Giessen, Giessen, Germany.ORCID https://orcid.org/0000-0001-7504-3417
Bernard MariUniversité Côte d'Azur, UMR CNRS 7275 Inserm 1323, IPMC, FHU-OncoAge, IHU RespiERA, Valbonne, France.ORCID https://orcid.org/0000-0002-0422-9182
Saverio BellusciThe Quzhou Affiliated Hospital of Wenzhou Medical University, Quzhou People's Hospital, Quzhou, China saverio.bellusci@innere.med.uni-giessen.de.

Funding

Lacrimal Gland Repair Using Progenitor CellsR01EY026202 · NEI · SCRIPPS RESEARCH INSTITUTE, THE · PI MAKARENKOVA, HELEN P. · 2016 to 2025
$5.2M
Salivary gland ionocyte organization and function during homeostasis, repair, and diseaseR01DE031044 · NIDCR · SCRIPPS RESEARCH INSTITUTE, THE · PI MAKARENKOVA, HELEN P. · 2021 to 2025
$3.0M
Establishing a mechanistic basis for enhanced tumorigenesis under chronic circadian disruptionR01CA271500 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI Katja A Lamia · 2023 to 2026
$2.4M
NCI NIH HHS R01 CA271500NEI NIH HHS R01 EY026202NIDCR NIH HHS R01 DE031044
6 · The paper itself

Abstract

backgroundFibrosis is often associated with aberrant repair mechanisms that ultimately lead to organ failure. In the lung, idiopathic pulmonary fibrosis (IPF) is a fatal form of interstitial lung disease for which there is currently no curative therapy. From the cell biology point of view, the cell of origin and eventual fate of activated myofibroblasts (aMYFs) have taken centre stage, as these cells are believed to drive structural remodelling and lung function impairment. While aMYFs are now widely believed to originate from alveolar fibroblasts, the heterogeneity and ultimate fate of aMYFs during fibrosis resolution remain elusive. We have shown previously that aMYF dedifferentiation and acquisition of a lipofibroblast (LIF)-like phenotype represent a route of fibrosis resolution.

methodsIn this study, we combined genetic lineage tracing and single-cell transcriptomics in mice, and data mining of human IPF datasets to decipher the heterogeneity of aMYFs and investigate differentiation trajectories during fibrosis resolution. Furthermore, organoid cultures were utilised as a functional readout for the alveolar mesenchymal niche activity during various phases of injury and repair in mice.

resultsOur data demonstrate that aMYFs consist of four subclusters displaying unique pro-alveologenic

conclusionOur work identifies a subcluster of aMYFs that is potentially relevant for future management of IPF.

Indexed as

Idiopathic Pulmonary FibrosisMyofibroblastsAnimalsCell DifferentiationDisease Models, AnimalFibroblastsHumansLungMaleMicePulmonary Alveoli

Identifiers

PMID39401861
PMCPMC11799885

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.