Evidence map›Paper›PMID 39401074›Full record

ArticleeLife2024

Root-specific theanine metabolism and regulation at the single-cell level in tea plants (

Shijia Lin, Yiwen Zhang, Shupei Zhang, Yijie Wei, Mengxue Han, Yamei Deng, Jiayi Guo, Biying Zhu, Tianyuan Yang, Enhua Xia and 3 more

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Root-specific expression ofHorticulture research · 2025
    Article
  9. Review
  10. Opportunities and challenges in the application of single-cell transcriptomics in plant tissue research.Physiology and molecular biology of plants : an international journal of functional plant biology · 2025
    Review
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Shijia Lin *State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.ORCID https://orcid.org/0009-0005-9762-0349
Yiwen Zhang *State Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Shupei ZhangState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Yijie WeiState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Mengxue HanState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Yamei DengState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Jiayi GuoState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Biying ZhuState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.ORCID https://orcid.org/0009-0000-9652-7787
Tianyuan YangState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Enhua XiaState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
Xiaochun WanState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.
William J LucasDepartment of Plant Biology, College of Biological Sciences, University of California, Davis, Davis, United States.
Zhaoliang ZhangState Key Laboratory of Tea Plant Biology and Utilization, Anhui Agricultural University, Hefei, China.ORCID https://orcid.org/0000-0001-6615-1598

Funding

Anhui Educational Committee Excellent Youth Talent Support project gxyqZD2022018Anhui Provincial Major Science and Technology Project 202103b06020024National Key R&D Program of China 2021YFD1601101National Key R&D Program of China 2022YFF1003103The National Natural Science Foundation of China 32072624
6 · The paper itself

Abstract

Root-synthesized secondary metabolites are critical quality-conferring compounds of foods, plant-derived medicines, and beverages. However, information at a single-cell level on root-specific secondary metabolism remains largely unexplored. L-Theanine, an important quality component of tea, is primarily synthesized in roots, from which it is then transported to new shoots of tea plant. In this study, we present a single-cell RNA sequencing (scRNA-seq)-derived map for the tea plant root, which enabled cell-type-specific analysis of glutamate and ethylamine (two precursors of theanine biosynthesis) metabolism, and theanine biosynthesis, storage, and transport. Our findings support a model in which the theanine biosynthesis pathway occurs via multicellular compartmentation and does not require high co-expression levels of transcription factors and their target genes within the same cell cluster. This study provides novel insights into theanine metabolism and regulation, at the single-cell level, and offers an example for studying root-specific secondary metabolism in other plant systems.

Indexed as

Camellia sinensisGene Expression Regulation, PlantGlutamatesPlant RootsSingle-Cell AnalysisSecondary MetabolismGlutamatestheanineCamellia sinensisdevelopmental biologymetabolismplant biologyregulationroot developmentscRNA-seqtheanine

Identifiers

PMID39401074
PMCPMC11473105

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.