Evidence map›Paper›PMID 39400961›Full record

ArticleJournal of cellular and molecular medicine2024

Classification and functional analysis of disulfidptosis-associated genes in sepsis.

Simeng He, Xiangxin Zhang, Zichen Wang, Qingju Zhang, Yu Yao, Jiaojiao Pang, Yuguo Chen

Abstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Simeng HeDepartment of Emergency Medicine, Qilu Hospital of Shandong University, Jinan, China.ORCID 0000-0002-3855-8005
Xiangxin ZhangDepartment of Emergency Medicine, Qilu Hospital of Shandong University, Jinan, China.
Zichen WangDepartment of Emergency Medicine, Qilu Hospital of Shandong University, Jinan, China.
Qingju ZhangDepartment of Emergency Medicine, Qilu Hospital of Shandong University, Jinan, China.
Yu YaoDepartment of Emergency Medicine, Qilu Hospital of Shandong University, Jinan, China.
Jiaojiao PangDepartment of Emergency Medicine, Qilu Hospital of Shandong University, Jinan, China.ORCID 0000-0002-7253-6563
Yuguo ChenDepartment of Emergency Medicine, Qilu Hospital of Shandong University, Jinan, China.

Funding

National Key R&D Program of China 2020YFC0846600National Key R&D Program of China 2020YFC1512700National Key R&D Program of China 2020YFC1512703National Key R&D Program of China 2020YFC1512705National Natural Science Foundation of China 81671952National Natural Science Foundation of China 81772036National Natural Science Foundation of China 81873950National Natural Science Foundation of China 81873953National Natural Science Foundation of China 82072144National Natural Science Foundation of China 82172127National Natural Science Foundation of China 82302433National S&T Fundamental Resources Investigation Project 2018FY100600National S&T Fundamental Resources Investigation Project 2018FY100602Natural Science Foundation of Shandong Province ZR2023QH324Taishan Pandeng Scholar Program of Shandong Province tspd20181220Taishan Young Scholar Program of Shandong Province tsqn20161065Taishan Young Scholar Program of Shandong Province tsqn201812129the Key R&D Program of Shandong Province 2021SFGC0503the State Key Program of the National Natural Science Foundation of China 82030059Youth Top-Talent Project of National Ten Thousand Talents Plan, Qilu Young Scholar Program and the Fundamental Research Funds of Shandong University 2018JC011
6 · The paper itself

Abstract

Sepsis represents a critical condition characterized by multiple-organ dysfunction resulting from inflammatory response to infection. Disulfidptosis is a newly identified type of programmed cell death that is intimately associated with the actin cytoskeleton collapse caused by glucose starvation and disulfide stress, but its role in sepsis is largely unknown. The study was to adopt a diagnostic and prognostic signature for sepsis with disulfidptosis based on the differentially expressed genes (DEGs) between sepsis and healthy people from GEO database. The disulfidptosis hub genes associated with sepsis were identified, and then developed consensus clustering and immune infiltration characteristics. Next, we evaluated disulfidptosis-related risk genes by using LASSO and Random Forest algorithms, and constructed the diagnostic sepsis model by nomogram. Finally, immune infiltration, GSVA analysis and mRNA-miRNA networks based on disulfidptosis-related DEGs were screened. There are five upregulated disulfidptosis-related genes and seven downregulated genes were filtered out. The six intersection disulfidptosis-related genes including LRPPRC, SLC7A11, GLUT, MYH9, NUBPL and GYS1 exhibited higher predictive ability for sepsis with an accuracy of 99.7%. In addition, the expression patterns of the critical genes were validated. The study provided a comprehensive view of disulfidptosis-based signatures to predict the prognosis, biological features and potential treatment directions for sepsis.

Indexed as

Regulated Cell DeathSepsisAnimalsCellular MicroenvironmentDisulfidesGene Expression ProfilingGene Regulatory NetworksMiceMice, Inbred C57BLMicroRNAsNomogramsDisulfidesMicroRNAsbioinformaticsdisulfidptosisgene expressionimmune infiltrationsepsis

Identifiers

PMID39400961
PMCPMC11472650

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.