Evidence map›Paper›PMID 39400584›Full record

ArticleAmerican journal of physiology. Cell physiology2024

Regulation of versican expression in macrophages is mediated by canonical type I interferon signaling via ISGF3.

Mary Y Chang, Christina K Chan, Jourdan E Brune, Anne M Manicone, Karol Bomsztyk, Charles W Frevert, William A Altemeier

Abstract read
In one paragraph

Article in American journal of physiology. Cell physiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. VCAN Is Essential for ERK5-Driven Tumorigenesis in Soft Tissue Sarcoma.International journal of biological sciences · 2026
    Article
  2. Advancements and future directions inAmerican journal of physiology. Cell physiology · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Mary Y ChangDepartment of Comparative Medicine, University of Washington, Seattle, Washington, United States.ORCID 0000-0001-6174-7923
Christina K ChanDepartment of Comparative Medicine, University of Washington, Seattle, Washington, United States.
Jourdan E BruneDepartment of Comparative Medicine, University of Washington, Seattle, Washington, United States.ORCID 0000-0001-8284-9881
Anne M ManiconeCenter for Lung Biology, University of Washington at South Lake Union, Seattle, Washington, United States.ORCID 0000-0002-3508-4422
Karol BomsztykDivision of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, United States.
Charles W FrevertDepartment of Comparative Medicine, University of Washington, Seattle, Washington, United States.ORCID 0000-0002-1037-3244
William A AltemeierCenter for Lung Biology, University of Washington at South Lake Union, Seattle, Washington, United States.ORCID 0000-0001-8860-405X

Funding

Regulation of Allergen-Induced Airway Pathophysiology by VersicanR01AI130280 · NIAID · UNIVERSITY OF WASHINGTON · PI FREVERT, CHARLES WAYNE, HALLSTRAND, TEAL S · 2019 to 2023
$3.8M
Impact of versican deficiency on the innate immune response to influenza virusR01AI136468 · NIAID · UNIVERSITY OF WASHINGTON · PI ALTEMEIER, WILLIAM A, FREVERT, CHARLES WAYNE · 2018 to 2022
$3.1M
MAP2K1 AND MAP2K2 IN ACUTE LUNG INJURY AND RESOLUTIONR01HL167273 · NHLBI · UNIVERSITY OF WASHINGTON · PI Anne M. Manicone · 2023 to 2026
$2.8M
PIXUL-FFPE: High throughput platform for chromatin and DNA sample preparation from formalin fixed paraffin embedded (FFPE) tissue samples- supplement application.R42HG010855 · NHGRI · MATCHSTICK TECHNOLOGIES, INC. · PI BOMSZTYK, KAROL · 2019 to 2022
$2.4M
Influence of Pre-Analytical Factors in Globlastoma MGMT Promoter Methylation Biomarker AssayU01CA246503 · NCI · UNIVERSITY OF WASHINGTON · PI BOMSZTYK, KAROL, ROSTOMILY, ROBERT C · 2020 to 2024
$2.0M
Role of cannabinoid receptor 1 in lung injury and resolutionR21AI147536 · NIAID · UNIVERSITY OF WASHINGTON · PI ALTEMEIER, WILLIAM A, GHARIB, SINA A · 2019 to 2020
$485k
HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI130280HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R01AI136468HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) R21AI147536NHGRI NIH HHS R42 HG010855NHLBI NIH HHS R01 HL167273NIAID NIH HHS R01 AI130280NIAID NIH HHS R01 AI136468NIAID NIH HHS R21 AI147536
6 · The paper itself

Abstract

Growing evidence supports a role for versican as an important component of the inflammatory response, with both pro- and anti-inflammatory roles depending on the specific context of the system or disease under investigation. Our goal is to understand the regulation of macrophage-derived versican and the role it plays in innate immunity. In previous work, we showed that LPS triggers a signaling cascade involving Toll-like receptor (TLR)4, the Trif adaptor, type I interferons, and the type I interferon receptor, leading to increased versican expression by macrophages. In the present study, we used a combination of chromatin immunoprecipitation, siRNA, chemical inhibitors, and mouse model approaches to investigate the regulatory events downstream of the type I interferon receptor to better define the mechanism controlling versican expression. Results indicate that transcriptional regulation by canonical type I interferon signaling via interferon-stimulated gene factor 3 (ISGF3), the heterotrimeric transcription factor complex of Irf9, Stat1, and Stat2, controls versican expression in macrophages exposed to LPS. This pathway is not dependent on MAPK signaling, which has been shown to regulate versican expression in other cell types. The stability of versican mRNA may also contribute to prolonged versican expression in macrophages. These findings strongly support a role for macrophage-derived versican as a type I interferon-stimulated gene and further our understanding of versican's role in regulating inflammation.

Indexed as

Interferon Type ILipopolysaccharidesMacrophagesSignal TransductionVersicansAnimalsGene Expression RegulationInterferon-Stimulated Gene Factor 3MiceMice, Inbred C57BLInterferon-Stimulated Gene Factor 3Interferon Type ILipopolysaccharidesVcan protein, mouseVersicansISGF3macrophagetype I interferonversican

Identifiers

PMID39400584
PMCPMC11559644

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.