Evidence map›Paper›PMID 39397453›Full record

ArticleBeijing da xue xue bao. Yi xue ban = Journal of Peking University. Health sciences2024

[Single nucleotide polymorphism heritability of non-syndromic cleft lip with or without cleft palate in Chinese population].

Enci Xue, Xi Chen, Xueheng Wang, Siyue Wang, Mengying Wang, Jin Li, Xueying Qin, Yiqun Wu, Nan Li, Jing Li and 5 more

Abstract readEnglish Abstract
In one paragraph

Article in Beijing da xue xue bao. Yi xue ban = Journal of Peking University. Health sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Enci XueDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Xi ChenDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Xueheng WangDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Siyue WangDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Mengying WangDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Jin LiDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Xueying QinDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Yiqun WuDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Nan LiDepartment of Oral and Maxillofacial Surgery, Peking University School of Stomatology, Beijing 100081, China.
Jing LiDepartment of Pediatric Dentistry, Peking University School of Stomatology, Beijing 100081, China.
Zhibo ZhouDepartment of Oral and Maxillofacial Surgery, Peking University School of Stomatology, Beijing 100081, China.
Hongping ZhuDepartment of Oral and Maxillofacial Surgery, Peking University School of Stomatology, Beijing 100081, China.
Tao WuDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Dafang ChenDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.
Yonghua HuDepartment of Epidemiology and Biostatistics, Peking University School of Public Health, Beijing 100191, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo delve into the intricate relationship between common genetic variations across the entire genome and the risk of non-syndromic cleft lip with or without cleft palate (NSCL/P).

methodsUtilizing summary statistics data from genome-wide association studies (GWAS), a thorough investigation to evaluate the impact of common variations on the genome were undertook. This involved assessing single nucleotide polymorphism (SNP) heritability across the entire genome, as well as within specific genomic regions. To ensure the robustness of our analysis, stringent quality control measures were applied to the GWAS summary statistics data. Criteria for inclusion encompassed the absence of missing values, a minor allele frequency ≥1%,

resultsOur study drew upon GWAS summary statistics data obtained from 806 NSCL/P trios, comprising a total of 2 418 individuals from the Chinese population. Following rigorous quality control procedures, 490 593 out of 492 993 SNP were deemed suitable for inclusion in SNP heritability calculations. The observed SNP heritability of NSCL/P was 0.55 (95%

conclusionOur study sheds light on the intricate interplay between common genetic variations and the risk of NSCL/P in the Chinese population. By elucidating the SNP heritability landscape across different genomic regions, we contribute valuable insights into the genetic basis of NSCL/P. The significant enrichment of SNP heritability within enhancer and super enhancer regions underscores the potential role of these regulatory elements in shaping the genetic susceptibility to NSCL/P. This paves the way for further research aimed at uncovering novel genetic pathogenic factors underlying NSCL/P pathogenesis.

Indexed as

Cleft LipCleft PalatePolymorphism, Single NucleotideChinaEast Asian PeopleGene FrequencyGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansLinkage DisequilibriumCase-parent triosNon-syndromic cleft lip with or without cleft palateSingle nucleotide polymorphism heritability

Identifiers

PMID39397453
PMCPMC11480541

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.