Evidence map›Paper›PMID 39396950›Full record

ArticleBMC plant biology2024

Transcriptome analysis reveals key regulatory networks and genes involved in the acquisition of cold stress memory in pepper seedlings.

Jian Li, Ping Yang, Hongbo Fu, Juan Li, Yanzhuang Wang, Keyan Zhu, Jihua Yu, Jie Li

Abstract read
In one paragraph

Article in BMC plant biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

8 authors.

Jian LiCollege of Horticulture, Gansu Agriculture University, Lanzhou, 730070, China.
Ping YangCollege of Biological and Agricultural Sciences, Honghe University, Mengzi, 661100, China.
Hongbo FuCollege of Biological and Agricultural Sciences, Honghe University, Mengzi, 661100, China.
Juan LiCollege of Biological and Agricultural Sciences, Honghe University, Mengzi, 661100, China.
Yanzhuang WangCollege of Horticulture and Forestry, Tarim University, Alar, 843300, China.
Keyan ZhuCollege of Horticulture, Gansu Agriculture University, Lanzhou, 730070, China.
Jihua YuCollege of Horticulture, Gansu Agriculture University, Lanzhou, 730070, China. yujihuagg@163.com.
Jie LiCollege of Biological and Agricultural Sciences, Honghe University, Mengzi, 661100, China. gsau23@126.com.

Funding

Yunnan Fundamental Research Projects 202401AT070059Yunnan Young and Middle Aged Academic and Technical Leaders Reserve Talents 202205AC160056
6 · The paper itself

Abstract

Temperature is an important limiting factor in the counter-seasonal cultivation of pepper. Currently, there are no studies on transcriptomic analysis of 'cold stress memory' in pepper. In this study, in order to understand the mechanism of 'cold stress memory' in pepper (Capsicum annuum L.), seedlings were subjected to the following treatments: normal temperature treatment (P0), the first cold treatment for 3 days (P3), the recovery temperature treatment for 3 days (R3), and another cold treatment for 3 days (RP3). The results showed that P3 plants wilted the most, RP3 the second and R3 the least. Leaf reactive oxygen species (ROS) and electrolyte leakage were the most in P3, the second in RP3 and the least in R3. In addition, RP3 had the highest accumulation of zeaxanthin, violaxanthin and β-cryptoxanthin, followed by P3, and R3 had the least. These results suggest that pepper seedlings are characterized by 'cold stress memory'. Transcriptomics was used to analyze the key genes and transcription factors involved in the biosynthesis of zeaxanthin, violaxanthin and β-cryptoxanthin during the formation of 'cold stress memory'. This study provides candidate genes and transcription factors for an in-depth study of the cold tolerance mechanism in pepper.

Indexed as

CapsicumCold-Shock ResponseGene Expression ProfilingSeedlingsCold TemperatureGene Expression Regulation, PlantGene Regulatory NetworksGenes, PlantTranscriptomeCold stress memoryKEGG enrichmentPepperRNA-seq

Identifiers

PMID39396950
PMCPMC11479542

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.