Evidence map›Paper›PMID 39394503›Full record

ArticleNature methods2024

Single-shot 20-fold expansion microscopy.

Shiwei Mitchell-Wang, Tay Won Shin, Harley B Yoder, Ryan B McMillan, Hanquan Su, Yixi Liu, Chi Zhang, Kylie S Leung, Peng Yin, Laura L Kiessling and 1 more

Abstract read
In one paragraph

Article in Nature methods, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. ONE microscopy.Nature protocols · 2026
    Review
  2. Review
  3. Thousandfold Expansion Microscopy.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
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  13. Article
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  16. Principles ofbioRxiv : the preprint server for biology · 2026
    Article
  17. Article
  18. Review
  19. Applications and development of in situ nucleic acid visualization techniques.Frontiers in bioengineering and biotechnology · 2026
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Shiwei Mitchell-Wang *McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-6097-3424
Tay Won Shin *McGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA.
Harley B YoderMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID http://orcid.org/0009-0000-7046-6904
Ryan B McMillanWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, USA.ORCID http://orcid.org/0000-0002-8905-0471
Hanquan SuWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, USA.
Yixi LiuMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA.
Chi ZhangMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA.
Kylie S LeungMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-0641-2183
Peng YinWyss Institute for Biologically Inspired Engineering, Harvard University, Boston, MA, USA.ORCID http://orcid.org/0000-0002-2769-6357
Laura L KiesslingDepartment of Chemistry, Massachusetts Institute of Technology, Cambridge, MA, USA. kiesslin@mit.edu.ORCID http://orcid.org/0000-0001-6829-1500
Edward S BoydenMcGovern Institute for Brain Research, Massachusetts Institute of Technology, Cambridge, MA, USA. edboyden@mit.edu.ORCID http://orcid.org/0000-0002-0419-3351

Funding

MOLECULAR BIOPHYSICS TRAINING GRANTT32GM008313 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MURTHY, VENKATESH N · 1989 to 2023
$14.6M
Synthetic Ligands for Modulating Immune Cell ResponsesR01AI055258 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KIESSLING, LAURA L · 2003 to 2024
$7.8M
Platform technologies for scalable highly multiplexed proteomic phenotyping of the brainRF1MH128861 · NIMH · HARVARD UNIVERSITY · PI CHUNG, KWANGHUN, DONG, HONG-WEI · 2021 to 2021
$5.5M
Expansion MicroscopyR01EB024261 · NIBIB · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BOYDEN, EDWARD S. · 2017 to 2025
$4.6M
Development of a scalable strategy for reconstructing cell-type determined connectome of the mammalian brainRF1MH124611 · NIMH · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CAI, DAWEN, CUI, MENG · 2020 to 2020
$3.9M
Mechanisms of pathology and neuronal hyperactivity in a memory circuit in Alzheimer's diseaseR01AG070831 · NIA · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BOYDEN, EDWARD S., TSAI, LI-HUEI · 2021 to 2025
$3.2M
Multiplexed Nanoscale Protein Mapping Through Expansion Microscopy and Immuno-SABERRF1MH124606 · NIMH · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BOYDEN, EDWARD S., YIN, PENG · 2020 to 2020
$2.7M
Lipid imaging expansion microscopy to study Alzheimer's diseaseR01AG087374 · NIA · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Edward S. Boyden, Li-Huei Tsai · 2024 to 2026
$2.3M
Howard Hughes Medical Institute (HHMI) InvestigatorNIAID NIH HHS R01 AI055258NIA NIH HHS R01 AG070831NIA NIH HHS R01 AG087374NIBIB NIH HHS R01 EB024261NIGMS NIH HHS T32 GM008313NIMH NIH HHS RF1 MH124606NIMH NIH HHS RF1 MH124611NIMH NIH HHS RF1 MH128861U.S. Department of Health & Human Services | NIH | Office of Extramural Research, National Institutes of Health (OER) R01EB024261
6 · The paper itself

Abstract

Expansion microscopy (ExM) is in increasingly widespread use throughout biology because its isotropic physical magnification enables nanoimaging on conventional microscopes. To date, ExM methods either expand specimens to a limited range (~4-10× linearly) or achieve larger expansion factors through iterating the expansion process a second time (~15-20× linearly). Here, we present an ExM protocol that achieves ~20× expansion (yielding <20-nm resolution on a conventional microscope) in a single expansion step, achieving the performance of iterative expansion with the simplicity of a single-shot protocol. This protocol, which we call 20ExM, supports postexpansion staining for brain tissue, which can facilitate biomolecular labeling. 20ExM may find utility in many areas of biological investigation requiring high-resolution imaging.

Indexed as

BrainAnimalsImage Processing, Computer-AssistedMiceMicroscopyMicroscopy, Fluorescence

Identifiers

PMID39394503
PMCPMC11541206

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.