Evidence map›Paper›PMID 39394410›Full record

ArticleNature structural & molecular biology2025

Structural basis of antimicrobial membrane coat assembly by human GBP1.

Tanja Kuhm, Clémence Taisne, Cecilia de Agrela Pinto, Luca Gross, Evdokia A Giannopoulou, Stefan T Huber, Els Pardon, Jan Steyaert, Sander J Tans, Arjen J Jakobi

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Review
  10. Structural and functional characterization of the brain-specific dynamin superfamily member RNF112.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Autophagy and Bacterial infections.Autophagy reports · 2025
    Review
  12. Integrative modeling of guanylate binding protein dimers.Protein science : a publication of the Protein Society · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Tanja KuhmDepartment of Bionanoscience, Kavli Insitute of Nanoscience, Delft University of Technology, Delft, The Netherlands.
Clémence TaisneDepartment of Bionanoscience, Kavli Insitute of Nanoscience, Delft University of Technology, Delft, The Netherlands.ORCID http://orcid.org/0000-0001-8474-2789
Cecilia de Agrela PintoDepartment of Bionanoscience, Kavli Insitute of Nanoscience, Delft University of Technology, Delft, The Netherlands.ORCID http://orcid.org/0000-0001-6909-1279
Luca GrossAMOLF, Amsterdam, The Netherlands.
Evdokia A GiannopoulouDepartment of Bionanoscience, Kavli Insitute of Nanoscience, Delft University of Technology, Delft, The Netherlands.ORCID http://orcid.org/0000-0001-5822-3117
Stefan T HuberDepartment of Bionanoscience, Kavli Insitute of Nanoscience, Delft University of Technology, Delft, The Netherlands.
Els PardonVIB-VUB Center for Structural Biology, Brussels, Belgium.ORCID http://orcid.org/0000-0002-2466-0172
Jan SteyaertVIB-VUB Center for Structural Biology, Brussels, Belgium.ORCID http://orcid.org/0000-0002-3825-874X
Sander J TansDepartment of Bionanoscience, Kavli Insitute of Nanoscience, Delft University of Technology, Delft, The Netherlands.
Arjen J JakobiDepartment of Bionanoscience, Kavli Insitute of Nanoscience, Delft University of Technology, Delft, The Netherlands. a.jakobi@tudelft.nl.ORCID http://orcid.org/0000-0002-7761-2027

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Guanylate-binding proteins (GBPs) are interferon-inducible guanosine triphosphate hydrolases (GTPases) mediating host defense against intracellular pathogens. Their antimicrobial activity hinges on their ability to self-associate and coat pathogen-associated compartments or cytosolic bacteria. Coat formation depends on GTPase activity but how nucleotide binding and hydrolysis prime coat formation remains unclear. Here, we report the cryo-electron microscopy structure of the full-length human GBP1 dimer in its guanine nucleotide-bound state and describe the molecular ultrastructure of the GBP1 coat on liposomes and bacterial lipopolysaccharide membranes. Conformational changes of the middle and GTPase effector domains expose the isoprenylated C terminus for membrane association. The α-helical middle domains form a parallel, crossover arrangement essential for coat formation and position the extended effector domain for intercalation into the lipopolysaccharide layer of gram-negative membranes. Nucleotide binding and hydrolysis create oligomeric scaffolds with contractile abilities that promote membrane extrusion and fragmentation. Our data offer a structural and mechanistic framework for understanding GBP1 effector functions in intracellular immunity.

Indexed as

Cell MembraneGTP-Binding ProteinsCryoelectron MicroscopyHumansLipopolysaccharidesLiposomesModels, MolecularProtein BindingProtein MultimerizationGBP1 protein, humanGTP-Binding ProteinsLipopolysaccharidesLiposomes

Identifiers

PMID39394410
PMCPMC11746146

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.