Evidence map›Paper›PMID 39393672›Full record

ReviewExperimental neurology2025

An infrastructure for qualified data sharing and team science in late-stage translational spinal cord injury research.

J Russell Huie, Abel Torres-Espin, Jeffrey Sacramento, Anastasia V Keller, Wilsaan M Joiner, Ryan North, David J Reinkensmeyer, Ephron S Rosenzweig, Jacob Koffler, Mark H Tuszynski and 6 more

Abstract readReview
In one paragraph

Review in Experimental neurology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

J Russell HuieBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, Weill Institute for Neurosciences, University of California, San Francisco, USA; San Francisco Veterans Affairs Health Care System, USA.
Abel Torres-EspinBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, Weill Institute for Neurosciences, University of California, San Francisco, USA; Department of Physical Therapy, Faculty of Rehabilitation Medicine, University of Alberta, Edmonton, AB, Canada; School of Public Health Sciences, University of Waterloo, ON, Canada.
Jeffrey SacramentoBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, Weill Institute for Neurosciences, University of California, San Francisco, USA.
Anastasia V KellerBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, Weill Institute for Neurosciences, University of California, San Francisco, USA.
Wilsaan M JoinerUniversity of California, Davis, CA, USA.
Ryan NorthUniversity of California, Davis, CA, USA.
David J ReinkensmeyerUniversity of California, Irvine, CA, USA.
Ephron S RosenzweigUniversity of California, San Diego, CA, USA.
Jacob KofflerUniversity of California, San Diego, CA, USA.
Mark H TuszynskiUniversity of California, San Diego, CA, USA; San Diego Veterans Affairs Health Care System, USA.
Carolyn J SparreySimon Fraser University, Vancouver, BC, Canada.
Jessica L NielsonDepartment of Psychiatry & Behavioral Sciences, University of Minnesota, Minneapolis, MN, USA.
Michael S BeattieBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, Weill Institute for Neurosciences, University of California, San Francisco, USA.
Jacqueline C BresnahanBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, Weill Institute for Neurosciences, University of California, San Francisco, USA.
Jeffrey S GretheUniversity of California, San Diego, CA, USA.
Adam R FergusonBrain and Spinal Injury Center (BASIC), Department of Neurological Surgery, Weill Institute for Neurosciences, University of California, San Francisco, USA; San Francisco Veterans Affairs Health Care System, USA. Electronic address: adam.ferguson@ucsf.edu.

Funding

National Institute on Aging (NIA) ColonyP51OD011107 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Simon J. Atkinson · 2012 to 2026
$191.5M
UCSF Core Center for Patient-centric Mechanistic Phenotyping in Chronic Low Back PainU19AR076737 · NIAMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LOTZ, JEFFREY C. · 2019 to 2023
$34.1M
Tools for Common Data Element Adoption in the Pan-Neurotrauma Data Commons (PANORAUMA)U24NS122732 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ADAM R FERGUSON, Jeffrey S. Grethe · 2021 to 2026
$5.0M
Maladaptive Plasticity in Spinal Cord Injury: Cellular MechanismsR01NS122888 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FERGUSON, ADAM R · 2021 to 2025
$3.0M
Translational Outcomes Project: Visualizing Syndromic Information and Outcomes for Neurotrauma (TOP-VISION)UH3NS106899 · NINDS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BEATTIE, MICHAEL S, BRESNAHAN, JACQUELINE C · 2020 to 2022
$1.2M
BLRD VA I01 BX005871BLRD VA I50 BX005878NIAMS NIH HHS U19 AR076737NIH HHS P51 OD011107NINDS NIH HHS R01 NS122888NINDS NIH HHS U24 NS122732NINDS NIH HHS UH3 NS106899RRD VA I01 RX001045RRD VA I01 RX002245RRD VA I01 RX002787
6 · The paper itself

Abstract

The complex and heterogeneous nature of spinal cord injury has limited translational bench-to-bedside results. The wide variety of data, including injury parameters, biochemical, histological, and behavioral outcome measures represent a 'big data' problem, calling for modern data science solutions. There are some instances in which SCI researchers collect sensitive data that needs to remain private, such as datasets designed to meet regulatory approval, sensitive intellectual property, and non-human primate studies. For these types of data, we have developed a Private Data Commons for SCI (PDC-SCI). Our objective is to give an overview of this novel data commons, describing how this type of commons works, how it can benefit the research community, and the cases in which it would be most useful. This private infrastructure is ideal for multi-lab transdisciplinary studies that require a well-organized, scalable data commons for rapid data sharing within a closed, distributed team. As a use-case for the PDC-SCI, we demonstrate the VA Gordon Mansfield SCI Consortium, in which multimodal data from behavior, biomechanics of injury, hospital records, imaging, and histology are integrated, shared, and analyzed to facilitate insights and knowledge discovery.

Indexed as

Information DisseminationSpinal Cord InjuriesTranslational Research, BiomedicalAnimalsHumansData scienceData sharingInformaticsScientific data repositoriesSpinal cord injury

Identifiers

PMID39393672
PMCPMC12599382

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.