Evidence map›Paper›PMID 39388236›Full record

ArticleeLife2024

The conserved genetic program of male germ cells uncovers ancient regulators of human spermatogenesis.

Rion Brattig-Correia, Joana M Almeida, Margot Julia Wyrwoll, Irene Julca, Daniel Sobral, Chandra Shekhar Misra, Sara Di Persio, Leonardo Gastón Guilgur, Hans-Christian Schuppe, Neide Silva and 12 more

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
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  7. Correlated Gene Copy Number Changes in a Seminal Fluid Protein Network inbioRxiv : the preprint server for biology · 2025
    Article
  8. Review
  9. Article
  10. Article
  11. Dichotomous transcriptome divergence at the cell-type level between thebioRxiv : the preprint server for biology · 2025
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Rion Brattig-Correia *Instituto Gulbenkian de Ciência, Oeiras, Portugal.
Joana M Almeida *Instituto Gulbenkian de Ciência, Oeiras, Portugal.
Margot Julia Wyrwoll *Centre of Medical Genetics, Institute of Reproductive Genetics, University and University Hospital of Münster, Münster, Germany.ORCID https://orcid.org/0000-0002-7651-2403
Irene JulcaSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Daniel SobralAssociate Laboratory i4HB - Institute for Health and Bioeconomy, NOVA School of Science and Technology, NOVA University Lisbon, Lisbon, Portugal.ORCID https://orcid.org/0000-0003-3955-0117
Chandra Shekhar MisraInstituto Gulbenkian de Ciência, Oeiras, Portugal.ORCID https://orcid.org/0000-0002-3544-4723
Sara Di PersioCentre of Reproductive Medicine and Andrology, University Hospital Münster, Münster, Germany.ORCID https://orcid.org/0000-0002-9279-7373
Leonardo Gastón GuilgurInstituto Gulbenkian de Ciência, Oeiras, Portugal.
Hans-Christian SchuppeClinic of Urology, Pediatric Urology and Andrology, Justus-Liebig-University, Giessen, Germany.
Neide SilvaInstituto Gulbenkian de Ciência, Oeiras, Portugal.ORCID https://orcid.org/0000-0002-3154-2959
Pedro PrudêncioInstituto de Medicina Molecular João Lobo Antunes, Faculdade de Medicina, Universidade de Lisboa, Lisboa, Portugal.
Ana NóvoaInstituto Gulbenkian de Ciência, Oeiras, Portugal.ORCID https://orcid.org/0000-0002-5668-5630
Ana S LeocádioInstituto Gulbenkian de Ciência, Oeiras, Portugal.
Joana BomInstituto Gulbenkian de Ciência, Oeiras, Portugal.
Sandra LaurentinoCentre of Reproductive Medicine and Andrology, University Hospital Münster, Münster, Germany.ORCID https://orcid.org/0000-0002-5213-2756
Moises MalloInstituto Gulbenkian de Ciência, Oeiras, Portugal.ORCID https://orcid.org/0000-0002-9744-0912
Sabine KlieschCentre of Reproductive Medicine and Andrology, University Hospital Münster, Münster, Germany.
Marek MutwilSchool of Biological Sciences, Nanyang Technological University, Singapore, Singapore.
Luis M Rocha *Instituto Gulbenkian de Ciência, Oeiras, Portugal.
Frank Tüttelmann *Centre of Medical Genetics, Institute of Reproductive Genetics, University and University Hospital of Münster, Münster, Germany.ORCID https://orcid.org/0000-0003-2745-9965
Jörg D Becker *Instituto Gulbenkian de Ciência, Oeiras, Portugal.ORCID https://orcid.org/0000-0002-6845-6122
Paulo Navarro-Costa *Instituto Gulbenkian de Ciência, Oeiras, Portugal.ORCID https://orcid.org/0000-0002-8543-4179

Funding

myAURA: Personalized Web Service for Epilepsy ManagementR01LM012832 · NLM · TRUSTEES OF INDIANA UNIVERSITY · PI BORNER, KATY, MILLER, WENDY RENEE · 2018 to 2021
$1.3M
Deutsche Forschungsgemeinschaft 329621271Fundação para a Ciência e a Tecnologia CEECIND/03345/2018Fundação para a Ciência e a Tecnologia EXPL/MEC-AND/0676/2021Fundação para a Ciência e a Tecnologia PD/BD/114362/2016Fundação para a Ciência e a Tecnologia PTDC/MEC-AND/30221/2017Ministry of Education, Singapore MOE2018-T2-2-053National Science Foundation Research Traineeship grant 1735095NIH HHS 1R01LM012832NLM NIH HHS R01 LM012832
6 · The paper itself

Abstract

Male germ cells share a common origin across animal species, therefore they likely retain a conserved genetic program that defines their cellular identity. However, the unique evolutionary dynamics of male germ cells coupled with their widespread leaky transcription pose significant obstacles to the identification of the core spermatogenic program. Through network analysis of the spermatocyte transcriptome of vertebrate and invertebrate species, we describe the conserved evolutionary origin of metazoan male germ cells at the molecular level. We estimate the average functional requirement of a metazoan male germ cell to correspond to the expression of approximately 10,000 protein-coding genes, a third of which defines a genetic scaffold of deeply conserved genes that has been retained throughout evolution. Such scaffold contains a set of 79 functional associations between 104 gene expression regulators that represent a core component of the conserved genetic program of metazoan spermatogenesis. By genetically interfering with the acquisition and maintenance of male germ cell identity, we uncover 161 previously unknown spermatogenesis genes and three new potential genetic causes of human infertility. These findings emphasize the importance of evolutionary history on human reproductive disease and establish a cross-species analytical pipeline that can be repurposed to other cell types and pathologies.

Indexed as

SpermatogenesisAnimalsEvolution, MolecularGerm CellsHumansMaleMiceSpermatocytesSpermatozoaTranscriptomeD. melanogasterevolutionary biologygene expressiongerm cellshumaninfertilitymedicinemeiosismousespermatogenesis

Identifiers

PMID39388236
PMCPMC11466473

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.