Evidence map›Paper›PMID 39387607›Full record

ArticleMicrobiology spectrum2024

Characterizing the urobiome in geriatric males with chronic indwelling urinary catheters: an exploratory longitudinal study.

Emma Stewart, Baylie R Hochstedler-Kramer, Mark Khemmani, Nina M Clark, Jorge P Parada, Ahmer Farooq, Chirag Doshi, Alan J Wolfe, Fritzie S Albarillo

Abstract read
In one paragraph

Article in Microbiology spectrum, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Emma StewartDepartment of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA.
Baylie R Hochstedler-KramerDepartment of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA.
Mark KhemmaniDepartment of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA.
Nina M ClarkDivision of Infectious Diseases, Loyola University Medical Center, Maywood, Illinois, USA.ORCID 0000-0001-5670-4443
Jorge P ParadaDivision of Infectious Diseases, Loyola University Medical Center, Maywood, Illinois, USA.
Ahmer FarooqDepartment of Urology, Loyola University Medical Center, Maywood, Illinois, USA.
Chirag DoshiDepartment of Urology, Loyola University Medical Center, Maywood, Illinois, USA.
Alan J WolfeDepartment of Microbiology and Immunology, Stritch School of Medicine, Loyola University Chicago, Maywood, Illinois, USA.ORCID 0000-0003-4532-0545
Fritzie S AlbarilloDivision of Infectious Diseases, Loyola University Medical Center, Maywood, Illinois, USA.ORCID 0000-0002-3441-301X

Funding

Loyola University Chicago (LUC)
6 · The paper itself

Abstract

The impact of chronic indwelling urinary catheters (IUCs) on the composition and stability of the urinary microbiota remains unknown. The primary aim of this study was to describe the urinary microbiomes of geriatric males with chronic IUCs. A secondary aim was to explore clinical catheter-associated urinary tract infection (CAUTI) courses of the participants. Geriatric male patients with chronic IUCs were followed longitudinally. Catheterized urine, catheter tips, and both urethral and periurethral swabs were collected from participants at monthly intervals. Microbes were isolated and identified from each specimen using an enhanced culture method called expanded quantitative urine culture (EQUC) and targeted 16S rRNA gene DNA sequencing. Microbial outcomes were examined both in the absence of urinary symptoms and in the context of clinical diagnosis of CAUTI. Ten male participants (mean age 86 years) were enrolled. Urinary microbiomes differed for each participant. However, within each individual, microbiomes were similar over time and across niches (bladder, catheter, urethra, and periurethra). Within-niche microbiomes differed across individuals, and this was observed over time. The most abundant bacteria isolated from all niches were known uropathogens. Six of 10 individuals met diagnostic criteria for CAUTI at least once during the 12-month observation period, but no evidence of this or antibiotic treatment/response was discernable in our monthly samples. The microbiomes of each participant were unique and remained similar over time and across niches. Longitudinal EQUC or 16S rRNA gene sequencing data could be useful to clinicians when diagnosing or treating possible CAUTI.IMPORTANCECatheter-associated urinary tract infections (CAUTIs) are serious but preventable nosocomial infections. The most common risk factor for developing CAUTI is prolonged use of indwelling urinary catheters (IUCs). This study provides the first longitudinal description of the urinary microbiomes of geriatric males with chronic IUCs, in the absence of urinary signs and symptoms, as a first step toward enhancing our knowledge of the impact of chronic IUCs on the composition and stability of the urinary microbiota. This is an understudied area, particularly for males.

Indexed as

BacteriaCatheter-Related InfectionsCatheters, IndwellingMicrobiotaRNA, Ribosomal, 16SUrinary CathetersUrinary Tract InfectionsAgedAged, 80 and overHumansLongitudinal StudiesMaleUrethraUrinary BladderUrinary CatheterizationRNA, Ribosomal, 16Scatheter-associated urinary tract infectionmicrobiomeurinary tract infectionurine microbiomeurobiome

Identifiers

PMID39387607
PMCPMC11536997

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