Evidence map›Paper›PMID 39387122›Full record

ArticleThe New phytologist2024

MpPUB9, a U-box E3 ubiquitin ligase, acts as a positive regulator by promoting the turnover of MpEXO70.1 under high salinity in Marchantia polymorpha.

Cheol Jin Lim, Hyeon Ji Seo, Haijing Yin, Na Hyun Cho, Hee Woong Yang, Tae Hyeon Park, Yun Ju Kim, Woo Taek Kim, Dong Hye Seo

Abstract read
In one paragraph

Article in The New phytologist, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Cheol Jin Lim *Department of Systems Biology and Division of Life Science, Yonsei University, Seoul, 03722, Korea.ORCID 0009-0004-2815-4252
Hyeon Ji Seo *Department of Systems Biology and Division of Life Science, Yonsei University, Seoul, 03722, Korea.ORCID 0009-0009-2730-9036
Haijing YinDepartment of Systems Biology and Division of Life Science, Yonsei University, Seoul, 03722, Korea.ORCID 0009-0003-0943-207X
Na Hyun ChoDepartment of Systems Biology and Division of Life Science, Yonsei University, Seoul, 03722, Korea.ORCID 0000-0003-4716-4654
Hee Woong YangDepartment of Systems Biology and Division of Life Science, Yonsei University, Seoul, 03722, Korea.ORCID 0009-0005-7271-2431
Tae Hyeon ParkDepartment of Systems Biology and Division of Life Science, Yonsei University, Seoul, 03722, Korea.ORCID 0009-0001-4947-0076
Yun Ju KimDepartment of Systems Biology and Division of Life Science, Yonsei University, Seoul, 03722, Korea.ORCID 0000-0003-4284-9144
Woo Taek KimDepartment of Systems Biology and Division of Life Science, Yonsei University, Seoul, 03722, Korea.ORCID 0000-0001-5027-4622
Dong Hye SeoDepartment of Systems Biology and Division of Life Science, Yonsei University, Seoul, 03722, Korea.ORCID 0000-0003-1243-4466

Funding

National Research Foundation of Korea 2018R1A6A1A03025607National Research Foundation of Korea 2020R1C1C1014389
6 · The paper itself

Abstract

Marchantia polymorpha, occupying a basal position in the monophyletic assemblage of land plants, displays a notable expansion of plant U-box (PUB) proteins compared with those in animals. We elucidated the roles of MpPUB9 in regulating salt stress tolerance in M. polymorpha. MpPUB9 expression was rapidly induced by high salinity and dehydration. MpPUB9 possessed an intact U-box domain in the N-terminus. MpPUB9-Citrine localized to punctate structures and was peripherally associated with microsomal membranes. Phenotypic analyses demonstrate that the hyponastic and epinastic thallus growth phenotypes, which were induced by the overexpression and suppression of MpPUB9, may provoke salt stress-resistant and -susceptible phenotypes, respectively. MpPUB9 was also found to directly interact with the exocyst protein MpEXO70.1, leading to its ubiquitination. Under high-salinity conditions, though the stability of MpPUB9 was dramatically increased, MpEXO70.1 showed slightly faster turnover rates. Transcriptome analyses showed that salt treatment and the overexpression of MpPUB9 co-upregulated the genes related to the modulation of H

Indexed as

ExocytosisMarchantiaPlant ProteinsSalinityStress, PhysiologicalUbiquitin-Protein LigasesVesicular Transport ProteinsAmino Acid MotifsAmino Acid SequenceAutophagyCell WallGene Expression Regulation, PlantSequence AlignmentSequence Homology, Amino AcidUbiquitinationPlant ProteinsUbiquitin-Protein LigasesVesicular Transport ProteinsEXO70 paralog proteinshigh salinityMarchantia polymorphamolecular evolutionubiquitinationU‐box E3 ligase

Identifiers

PMID39387122
PMCPMC11579444

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.