Evidence map›Paper›PMID 39386830›Full record

ArticleHeliyon2024

Targeted metabolomics of muscle amino acid profles and hepatic transcriptomics analyses in grass carp (

Meilin Hao, Junhong Zhu, Yuxiao Xie, Wenjie Cheng, Lanlan Yi, Sumei Zhao

Abstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Meilin HaoCollege of Biology and Agriculture (College of Food Science and Technology), Zunyi Normal College, Zunyi, 563006, China.
Junhong ZhuCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming, 650201, China.
Yuxiao XieCollege of Biology and Agriculture (College of Food Science and Technology), Zunyi Normal College, Zunyi, 563006, China.
Wenjie ChengCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming, 650201, China.
Lanlan YiCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming, 650201, China.
Sumei ZhaoCollege of Animal Science and Technology, Yunnan Agricultural University, Kunming, 650201, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

While tissue amino acid compositions reflect that of the dietary protein source, and the liver orchestrates amino acid metabolism. In this study, we investigated the muscle amino acid profiles in ordinary and crisp grass carp. The 22 amino acids were measured, and seventeen showed significant concentration differences. To understand the molecular mechanisms behind changes, we analyzed the liver transcriptome, and the 2519 differentially expressed genes (DEGs) were identified, with 1156 up-regulated and 1363 down-regulated genes. DEGs were enriched in ribosome-related biological processes. KEGG pathway analysis showed enrichment in tryptophan metabolism, lysine degradation, valine, leucine and isoleucine degradation, galactose metabolism, and glutathione metabolism with up-regulated genes, arginine and proline metabolism, arginine biosynthesis and alanine, aspartate, amino sugar and nucleotide sugar metabolism, N-Glycan biosynthesis and glutamate metabolism with down-regulated genes. A protein-protein interaction network with 260 nodes and 249 edges was constructed, and 3 modules were extracted. The top 10 hub genes with close connections to other nodes were

Indexed as

Amino acidsBroad beanCrisp grass carpTranscriptomics

Identifiers

PMID39386830
PMCPMC11462030

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.