Evidence map›Paper›PMID 39386738›Full record

ArticlebioRxiv : the preprint server for biology2024

Mapping herpesvirus-driven impacts on the cellular milieu and transcriptional profile of Kaposi sarcoma in patient-derived mouse models.

Xiaofan Li, Zoë Weaver Ohler, Amanda Day, Laura Bassel, Anna Grosskopf, Bahman Afsari, Takanobu Tagawa, Wendi Custer, Ralph Mangusan, Kathryn Lurain and 4 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Xiaofan LiHIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute; Bethesda, MD.
Zoë Weaver OhlerCenter for Advanced Preclinical Research, Center for Cancer Research, National Cancer Institute; Frederick, MD.
Amanda DayCenter for Advanced Preclinical Research, Center for Cancer Research, National Cancer Institute; Frederick, MD.
Laura BasselCenter for Advanced Preclinical Research, Center for Cancer Research, National Cancer Institute; Frederick, MD.
Anna GrosskopfHIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute; Bethesda, MD.
Bahman AfsariHIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute; Bethesda, MD.
Takanobu TagawaHIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute; Bethesda, MD.
Wendi CusterCenter for Advanced Preclinical Research, Center for Cancer Research, National Cancer Institute; Frederick, MD.
Ralph MangusanHIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute; Bethesda, MD.
Kathryn LurainHIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute; Bethesda, MD.
Robert YarchoanHIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute; Bethesda, MD.
Joseph ZiegelbauerHIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute; Bethesda, MD.
Ramya RamaswamiHIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute; Bethesda, MD.
Laurie T KrugHIV and AIDS Malignancy Branch, Center for Cancer Research, National Cancer Institute; Bethesda, MD.ORCID 0000-0002-9648-522X

Funding

WORK ORDER 126643 B539 EXPAND IC SUITE75N91019D00024 · NIAID · LEIDOS BIOMEDICAL RESEARCH, INC. · PI BRISCOE, LYNN · 2019 to 2025
$3932.6M
Investigation of viral and host determinants of gammaherpesvirus pathogenesisZIABC011953 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI KRUG, LAURIE TATE · 2020 to 2025
$8.1M
Intramural NIH HHS ZIA BC011953NCI NIH HHS 75N91019D00024
6 · The paper itself

Abstract

Kaposi sarcoma (KS) is defined by aberrant angiogenesis driven by Kaposi sarcoma herpesvirus (KSHV)-infected spindle cells with endothelial characteristics. KS research is hindered by rapid loss of KSHV infection upon explant culture of tumor cells. Here, we establish patient-derived KS xenografts (PDXs) upon orthotopic implantation of cutaneous KS biopsies in immunodeficient mice. KS tumors were maintained in 27/28 PDX until experimental endpoint, up to 272 days in the first passage of recipient mice. KSHV latency associated nuclear antigen (LANA)+ endothelial cell density increased by a mean 4.3-fold in 14/15 PDX analyzed by IHC at passage 1 compared to respective input biopsies, regardless of implantation variables and clinical features of patients. The Ki-67 proliferation marker colocalized with LANA more frequently in PDXs. Spatial transcriptome analysis revealed increased expression of viral transcripts from latent and lytic gene classes in the PDX. The expanded KSHV+ regions of the PDX maintained signature gene expression of KS tumors, with enrichment in pathways associated with angiogenesis and endothelium development. Cells with characteristics of tumor-associated fibroblasts derived from PDX were propagated for 15 passages. These fibroblast-like cells were permissive for

Identifiers

PMID39386738
PMCPMC11463583

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.